Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067630.3 Solanum lycopersicum HOM05M006870 ORTHO05M008552 1.0e-84 315.8 152 100.0
Potri.006G248300 Populus trichocarpa HOM05M006870 ORTHO05M008552 1.1e-25 119.8 156 47.4
Glyma.06G072000 Glycine max HOM05M006870 ORTHO05M008552 8.9e-20 100.1 142 45.8
Glyma.04G070000 Glycine max HOM05M006870 ORTHO05M008552 1.5e-19 99.4 143 42.7
p5.00_sc00018_p0252 Elaeis guineensis HOM05M006870 ORTHO05M008552 3.7e-18 94.7 156 38.5
Spipo14G0002500 Spirodela polyrhiza HOM05M006870 ORTHO05M008552 4.6e-16 87.8 153 41.2
CALSI_Maker00008653 Calamus simplicifolius HOM05M006870 ORTHO05M008552 3.0e-15 85.1 146 39.0
Ma06_g03350 Musa acuminata HOM05M006870 ORTHO05M008552 6.6e-15 84.0 159 37.1
p5.00_sc00105_p0040 Elaeis guineensis HOM05M006870 ORTHO05M008552 5.6e-14 80.9 149 35.6
DDU613G0479 Dioscorea dumetorum HOM05M006870 ORTHO05M008552 1.2e-13 79.7 133 36.8
Aco005447 Ananas comosus HOM05M006870 ORTHO05M008552 3.6e-13 78.2 166 34.3
AT2G25625 Arabidopsis thaliana HOM05M006870 ORTHO05M008552 4.7e-13 77.8 161 39.8
Dexi3B01G0016090 Digitaria exilis HOM05M006870 ORTHO05M008552 1.8e-12 75.9 120 35.8
Pahal.3G170800 Panicum hallii HOM05M006870 ORTHO05M008552 1.8e-12 75.9 158 35.4
PH02Gene22256 Phyllostachys edulis HOM05M006870 ORTHO05M008552 5.2e-12 74.3 116 34.5
CDE07G1568 Ceratophyllum demersum HOM05M006870 ORTHO05M008552 8.9e-12 73.6 128 36.7
Dexi3A01G0015800 Digitaria exilis HOM05M006870 ORTHO05M008552 3.4e-11 71.6 120 34.2
Ot_Chr5_g03806 Oropetium thomaeum HOM05M006870 ORTHO05M008552 1.3e-10 69.7 169 32.0
Zosma01g06010 Zostera marina HOM05M006870 ORTHO05M008552 1.7e-10 69.3 138 34.1
Sobic.009G241400 Sorghum bicolor HOM05M006870 ORTHO05M008552 3.7e-10 68.2 68 47.1
GWHGASIY036158 Secale cereale HOM05M006870 ORTHO05M008552 8.3e-10 67.0 121 32.2
Zm00001eb296620 Zea mays B73 HOM05M006870 ORTHO05M008552 8.3e-10 67.0 114 34.2
AET1Gv20984300 Aegilops tauschii HOM05M006870 ORTHO05M008552 1.1e-09 66.6 120 33.3
CDE06G2386 Ceratophyllum demersum HOM05M006870 ORTHO05M008552 1.1e-09 66.6 126 36.5
TraesCS1D03G0972500 Triticum aestivum HOM05M006870 ORTHO05M008552 1.1e-09 66.6 120 33.3
TraesCS1B03G1192600 Triticum aestivum HOM05M006870 ORTHO05M008552 2.4e-09 65.5 85 38.8
Bradi2g15690 Brachypodium distachyon HOM05M006870 ORTHO05M008552 3.2e-09 65.1 69 46.4
Horvu_MOREX_1H01G587000 Hordeum vulgare HOM05M006870 ORTHO05M008552 3.2e-09 65.1 85 38.8
Sspon.07G0001580-4D Saccharum spontaneum HOM05M008545 ORTHO05M002874 3.2e-09 65.1 60 45.0
TraesCS1A03G1011500 Triticum aestivum HOM05M006870 ORTHO05M008552 3.2e-09 65.1 106 33.0
EJB05_35975 Eragrostis curvula HOM05M006870 ORTHO05M008552 5.4e-09 64.3 126 33.3
Misin17G251300 Miscanthus sinensis HOM05M006870 ORTHO05M008552 5.4e-09 64.3 149 31.5
TRIDC1BG069930 Triticum dicoccoides HOM05M006870 ORTHO05M008552 5.4e-09 64.3 85 37.6
Misin17G251200 Miscanthus sinensis HOM05M006870 ORTHO05M008552 1.2e-08 63.2 128 33.6
MBI01_g03566_MAGBIO Magnolia biondii HOM05M006870 ORTHO05M008552 1.6e-08 62.8 153 30.1
Sspon.07G0001580-3C Saccharum spontaneum HOM05M006870 ORTHO05M008552 1.6e-08 62.8 84 38.1
OsKitaake05g272901 Oryza sativa Kitaake HOM05M006870 ORTHO05M008552 2.1e-08 62.4 83 37.3
GWHGASIY007826 Secale cereale HOM05M006870 ORTHO05M008552 2.1e-08 62.4 43 58.1
GWHGASIY042296 Secale cereale HOM05M006870 ORTHO05M008552 2.1e-08 62.4 72 40.3
ATR0083G010 Amborella trichopoda HOM05M006870 ORTHO05M008552 3.5e-08 61.6 151 32.5
GWHGAORA038904 Cenchrus purpureus HOM05M006870 ORTHO05M008552 3.5e-08 61.6 73 42.5
GWHGAZTO036328 Oryza alta HOM05M006870 ORTHO05M008552 3.5e-08 61.6 36 63.9
GWHGAZTO085219 Oryza alta HOM05M006870 ORTHO05M008552 3.5e-08 61.6 45 55.6
ATR0260G001 Amborella trichopoda HOM05M006870 ORTHO05M008552 4.6e-08 61.2 120 32.5
Dexi3A01G0015810 Digitaria exilis HOM05M006870 ORTHO05M008552 4.6e-08 61.2 36 66.7
EJB05_36439 Eragrostis curvula HOM05M006870 ORTHO05M008552 4.6e-08 61.2 68 44.1
EJB05_36452 Eragrostis curvula HOM05M006870 ORTHO05M008552 4.6e-08 61.2 68 44.1
Misin16G244800 Miscanthus sinensis HOM05M006870 ORTHO05M008552 4.6e-08 61.2 36 66.7
Dexi3B01G0016100 Digitaria exilis HOM05M006870 ORTHO05M008552 6.0e-08 60.8 36 63.9
Os05g0575000 Oryza sativa ssp. japonica HOM05M006870 ORTHO05M008552 6.0e-08 60.8 36 63.9
Sobic.009G241300 Sorghum bicolor HOM05M006870 ORTHO05M008552 6.0e-08 60.8 36 66.7
Seita.3G137100 Setaria italica HOM05M006870 ORTHO05M008552 7.8e-08 60.5 51 51.0
Sevir.3G139000 Setaria viridis HOM05M006870 ORTHO05M008552 7.8e-08 60.5 51 51.0
TraesCS2D03G0833600 Triticum aestivum HOM05M006870 ORTHO05M008552 7.8e-08 60.5 79 39.2
TraesCS5D03G0287000 Triticum aestivum HOM05M006870 ORTHO05M008552 2.3e-07 58.9 72 41.7
TraesCS3D03G0425400 Triticum aestivum HOM05M006870 ORTHO05M008552 3.0e-07 58.5 43 53.5
Sevir.3G138900 Setaria viridis HOM05M006870 ORTHO05M008552 3.9e-07 58.2 70 40.0
Seita.3G137000 Setaria italica HOM05M006870 ORTHO05M008552 5.1e-07 57.8 158 25.3
Zjn_sc02922.1.g00020.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M006870 ORTHO05M008552 5.1e-07 57.8 68 41.2
CDE06G2168 Ceratophyllum demersum HOM05M006870 ORTHO05M008552 8.6e-07 57.0 36 61.1
AET6Gv20758100 Aegilops tauschii HOM05M006870 ORTHO05M008552 2.5e-06 55.5 38 57.9
Pahal.3G170700 Panicum hallii HOM05M006870 ORTHO05M008552 3.3e-06 55.1 81 34.6
AET2Gv20214300 Aegilops tauschii HOM05M006870 ORTHO05M008552 7.3e-06 53.9 36 52.8
Sspon.07G0001580-1A Saccharum spontaneum HOM05M006870 ORTHO05M008552 9.5e-06 53.5 35 60.0

Aegilops tauschii (3 genes)
Allium sativum (0 genes)
Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (3 genes)
Glycine max (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (0 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (3 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (1 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (1 genes)
Zea mays B104 (0 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings