Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g045620.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 4.7e-64 246.9 122 100.0
Solyc00g500037.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.2e-30 136.0 88 80.7
Solyc00g500046.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.2e-30 136.0 88 80.7
Solyc00g500081.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.2e-30 136.0 88 80.7
Solyc00g500128.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.2e-30 136.0 88 80.7
Solyc00g500198.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.2e-30 136.0 88 80.7
Solyc00g500327.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.2e-30 136.0 88 80.7
Solyc00g500148.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 9.9e-30 132.9 88 79.5
Solyc10g018980.3 Solanum lycopersicum HOM05M001177 ORTHO05M001237 4.9e-29 130.6 77 80.5
Potri.013G143400 Populus trichocarpa HOM05M001177 ORTHO05M001237 6.4e-29 130.2 88 77.3
Aco029013 Ananas comosus HOM05M001177 ORTHO05M001237 2.7e-27 124.8 88 75.0
ATR0258G003 Amborella trichopoda HOM05M001177 ORTHO05M001237 3.9e-26 120.9 88 75.0
Solyc04g024540.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 5.1e-26 120.6 70 82.9
DDU125G0009 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.1e-25 119.4 88 72.7
DDU125G0023 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.1e-25 119.4 88 72.7
DDU643G0113 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.1e-25 119.4 88 72.7
Aco025943 Ananas comosus HOM05M001177 ORTHO05M001237 1.5e-25 119.0 88 72.7
Aco019186 Ananas comosus HOM05M001177 ORTHO05M015871 3.3e-25 117.9 89 71.9
Asa3G05072 Allium sativum HOM05M001177 ORTHO05M001237 4.3e-25 117.5 70 82.9
Asa4G03323 Allium sativum HOM05M001177 ORTHO05M001237 4.3e-25 117.5 70 82.9
Asa5G00234 Allium sativum HOM05M001177 ORTHO05M001237 4.3e-25 117.5 70 82.9
Asa6G03513 Allium sativum HOM05M001177 ORTHO05M001237 4.3e-25 117.5 70 82.9
ATCG00860 Arabidopsis thaliana HOM05M001177 ORTHO05M001237 1.3e-24 115.9 85 71.8
ATCG01280 Arabidopsis thaliana HOM05M001177 ORTHO05M001237 1.3e-24 115.9 85 71.8
Solyc01g017110.2 Solanum lycopersicum HOM05M001177 ORTHO05M001237 3.9e-18 94.4 56 80.4
Solyc09g031840.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 7.6e-14 80.1 58 74.1
Solyc05g047670.1 Solanum lycopersicum HOM05M001177 ORTHO05M001852 4.9e-13 77.4 37 94.6
Solyc04g050840.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.4e-12 75.9 58 70.7
DDU747G0007 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.0e-10 69.7 111 46.8
DDU197G0012 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.3e-10 68.6 59 64.4
DDU581G0028 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.3e-10 68.6 59 64.4
DDU643G0124 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.3e-10 68.6 59 64.4
DDU747G0017 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.3e-10 68.6 59 64.4
Asa6G02659 Allium sativum HOM05M001177 ORTHO05M001237 9.7e-09 63.2 31 90.3

Aegilops tauschii (0 genes)
Allium sativum (5 genes)
Amborella trichopoda (1 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (8 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (0 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza alta (0 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (0 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (0 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (0 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (14 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (0 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings