Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g016317.1 Solanum lycopersicum HOM05M003063 ORTHO05M002288 2.2e-57 224.6 106 100.0
Solyc08g016210.3 Solanum lycopersicum HOM05M003063 ORTHO05M002288 8.9e-19 96.3 86 58.1
Solyc04g014400.4 Solanum lycopersicum HOM05M003063 ORTHO05M002288 3.0e-14 81.3 83 50.6
Solyc08g016310.3 Solanum lycopersicum HOM05M003063 ORTHO05M002288 3.9e-14 80.9 69 60.9
Glyma.18G195200 Glycine max HOM05M003063 ORTHO05M002288 9.0e-11 69.7 88 38.6
Glyma.07G143900 Glycine max HOM05M003063 ORTHO05M002288 1.5e-10 68.9 84 39.3
Potri.003G013156 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.0e-10 68.6 81 38.3
Glyma.07G144100 Glycine max HOM05M003063 ORTHO05M002288 4.4e-10 67.4 84 39.3
Glyma.07G143500 Glycine max HOM05M003063 ORTHO05M002288 1.3e-09 65.9 84 40.5
Potri.005G009300 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.7e-09 65.5 80 37.5
Potri.001G063700 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.9e-09 64.7 81 34.6
Potri.003G026914 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.9e-09 64.7 81 37.0
Potri.018G145512 Populus trichocarpa HOM05M003063 ORTHO05M002288 4.9e-09 63.9 84 39.3
Potri.001G064900 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.4e-09 63.5 84 40.5
Potri.001G065327 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.4e-09 63.5 83 41.0
Potri.003G013700 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.4e-09 63.5 81 38.3
Potri.003G028557 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.4e-09 63.5 81 38.3
Potri.005G013800 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.4e-09 63.5 76 36.8
Potri.018G145522 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.4e-09 63.5 81 33.3
Potri.001G065309 Populus trichocarpa HOM05M003063 ORTHO05M002288 8.4e-09 63.2 86 39.5
Potri.003G026308 Populus trichocarpa HOM05M003063 ORTHO05M002288 8.4e-09 63.2 81 37.0
Potri.003G013200 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.4e-08 62.4 81 37.0
Potri.003G025100 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.4e-08 62.4 87 39.1
Potri.005G013200 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.4e-08 62.4 80 35.0
Glyma.18G273000 Glycine max HOM05M003063 ORTHO05M002288 1.9e-08 62.0 84 34.5
Potri.018G144300 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.9e-08 62.0 84 36.9
Potri.017G018700 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.4e-08 61.6 80 35.0
Potri.018G145516 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.4e-08 61.6 84 36.9
Potri.005G008800 Populus trichocarpa HOM05M003063 ORTHO05M002288 3.2e-08 61.2 76 39.5
Potri.003G041600 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.2e-07 59.3 82 34.1
Potri.005G013400 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.2e-07 59.3 80 33.8
Potri.001G064600 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.6e-07 58.9 84 38.1
Potri.018G148000 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.6e-07 58.9 81 34.6
Potri.001G065300 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.1e-07 58.5 82 35.4
Potri.005G007600 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.7e-07 58.2 80 33.8
Potri.005G013100 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.7e-07 58.2 80 33.8
Glyma.18G193800 Glycine max HOM05M003063 ORTHO05M002288 6.0e-07 57.0 80 36.2
Potri.005G007900 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.0e-07 57.0 80 33.8
Potri.005G009700 Populus trichocarpa HOM05M003063 ORTHO05M002288 6.0e-07 57.0 80 33.8
Potri.018G144600 Populus trichocarpa HOM05M003063 ORTHO05M002288 1.7e-06 55.5 82 32.9
Potri.005G011600 Populus trichocarpa HOM05M003063 ORTHO05M002288 2.3e-06 55.1 78 33.3
Potri.001G063900 Populus trichocarpa HOM05M003063 ORTHO05M002288 3.0e-06 54.7 79 36.7
Potri.001G063909 Populus trichocarpa HOM05M003063 ORTHO05M002288 3.9e-06 54.3 82 32.9
Potri.018G144700 Populus trichocarpa HOM05M003063 ORTHO05M002288 3.9e-06 54.3 83 34.9

Aegilops tauschii (0 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (6 genes)
Hordeum vulgare (0 genes)
Lolium perenne (0 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza alta (0 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (0 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (34 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (0 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (0 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (0 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings