Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g032140.3 Solanum lycopersicum HOM05M000126 ORTHO05M000055 4.1e-47 190.3 96 100.0
Solyc01g050010.3 Solanum lycopersicum HOM05M000126 ORTHO05M000055 1.6e-14 82.0 46 91.3
OB02G32530 Oryza brachyantha HOM05M000126 ORTHO05M000055 1.1e-07 59.3 49 55.1
DDU693G0162 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 1.4e-07 58.9 58 44.8
DDU739G0611 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 2.4e-07 58.2 51 49.0
DDU330G0022 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 3.2e-07 57.8 58 44.8
MBI15_g45660_MAGBIO Magnolia biondii HOM05M000126 ORTHO05M000055 3.2e-07 57.8 46 54.3
OsR498G0305632100.01 Oryza sativa ssp. indica HOM05M000126 ORTHO05M000055 4.2e-07 57.4 49 57.1
Solyc02g014020.3 Solanum lycopersicum HOM05M000126 ORTHO05M000055 4.2e-07 57.4 50 62.0
DDU596G0002 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 5.4e-07 57.0 70 44.3
DDU775G0260 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 5.4e-07 57.0 70 44.3
EJB05_00590 Eragrostis curvula HOM05M000126 ORTHO05M000055 5.4e-07 57.0 49 55.1
MBI18_g04724_MAGBIO Magnolia biondii HOM05M000609 ORTHO05M000055 5.4e-07 57.0 46 54.3
MBI19_g21655_MAGBIO Magnolia biondii HOM05M000126 ORTHO05M000055 7.1e-07 56.6 46 54.3
Zm00007a00026378 Zea mays B104 HOM05M000126 ORTHO05M000055 7.1e-07 56.6 63 47.6
DDU486G0134 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 9.3e-07 56.2 46 54.3
DDU421G0064 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 1.2e-06 55.8 46 56.5
DDU499G0005 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 1.2e-06 55.8 46 56.5
MBI18_g10199_MAGBIO Magnolia biondii HOM05M000126 ORTHO05M000055 1.2e-06 55.8 47 53.2
Sspon.02G0028830-3D Saccharum spontaneum HOM05M006210 ORTHO05M007461 1.2e-06 55.8 46 58.7
DDU691G0002 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 1.6e-06 55.5 85 36.5
EJB05_08597 Eragrostis curvula HOM05M000126 ORTHO05M000055 1.6e-06 55.5 46 56.5
MBI05_g01278_MAGBIO Magnolia biondii HOM05M000609 ORTHO05M000055 1.6e-06 55.5 46 52.2
Os05g0219300 Oryza sativa ssp. japonica HOM05M000126 ORTHO05M000055 1.6e-06 55.5 49 55.1
DDU002G0438 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 2.1e-06 55.1 85 35.3
DDU482G0136 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 2.1e-06 55.1 47 51.1
OB04G18790 Oryza brachyantha HOM05M000126 ORTHO05M000055 2.1e-06 55.1 85 36.5
GWHGAZTO039367 Oryza alta HOM05M000126 ORTHO05M000055 2.7e-06 54.7 49 51.0
Os01g0802400 Oryza sativa ssp. japonica HOM05M000126 ORTHO05M000055 2.7e-06 54.7 46 58.7
Os04g0542100 Oryza sativa ssp. japonica HOM05M000126 ORTHO05M000055 2.7e-06 54.7 46 58.7
Os07g0564533 Oryza sativa ssp. japonica HOM05M000126 ORTHO05M000055 2.7e-06 54.7 46 58.7
Os08g0344800 Oryza sativa ssp. japonica HOM05M000126 ORTHO05M000055 2.7e-06 54.7 46 58.7
Os09g0101200 Oryza sativa ssp. japonica HOM05M000126 ORTHO05M000055 2.7e-06 54.7 49 51.0
DDU086G0006 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 3.5e-06 54.3 46 54.3
DDU377G0013 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 3.5e-06 54.3 46 54.3
DDU905G0002 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 3.5e-06 54.3 46 52.2
EJB05_33621 Eragrostis curvula HOM05M000126 ORTHO05M000055 3.5e-06 54.3 46 58.7
V3.Lp_chr3_0G9122 Lolium perenne HOM05M000126 ORTHO05M000055 3.5e-06 54.3 46 56.5
MBI13_g29288_MAGBIO Magnolia biondii HOM05M000126 ORTHO05M000055 3.5e-06 54.3 46 52.2
GWHGAZTO026185 Oryza alta HOM05M000126 ORTHO05M000055 3.5e-06 54.3 49 51.0
GWHGAZTO028503 Oryza alta HOM05M000126 ORTHO05M000055 3.5e-06 54.3 49 53.1
PH02Gene00489 Phyllostachys edulis HOM05M000126 ORTHO05M000055 3.5e-06 54.3 47 51.1
DDU454G0009 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 4.6e-06 53.9 46 54.3
MBI11_g15183_MAGBIO Magnolia biondii HOM05M000126 ORTHO05M000055 4.6e-06 53.9 46 54.3
TRITD5Bv1G122900 Triticum turgidum HOM05M000126 ORTHO05M000055 4.6e-06 53.9 49 49.0
Zm00007a00022809 Zea mays B104 HOM05M000126 ORTHO05M000055 4.6e-06 53.9 63 42.9
DDU879G0202 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 6.0e-06 53.5 58 43.1
OsR498G0510040400.01 Oryza sativa ssp. indica HOM05M000126 ORTHO05M000055 6.0e-06 53.5 49 51.0
TRITD1Bv1G055800 Triticum turgidum HOM05M000126 ORTHO05M000055 6.0e-06 53.5 44 50.0
DDU481G0031 Dioscorea dumetorum HOM05M000126 ORTHO05M000055 7.9e-06 53.1 46 54.3
V3.Lp_scaffold_621G42 Lolium perenne HOM05M000126 ORTHO05M000055 7.9e-06 53.1 46 54.3
TRITD3Bv1G046480 Triticum turgidum HOM05M000126 ORTHO05M000055 7.9e-06 53.1 53 50.9


User provided reference genes

Program Settings