Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g025860.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 7.4e-80 299.7 147 100.0
Solyc04g009660.2 Solanum lycopersicum HOM05M000082 ORTHO05M000337 2.5e-43 178.3 162 59.9
Solyc04g009290.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 4.7e-42 174.1 162 60.5
Solyc04g009240.2 Solanum lycopersicum HOM05M000082 ORTHO05M000337 6.1e-42 173.7 166 57.8
Solyc04g009690.2 Solanum lycopersicum HOM05M000082 ORTHO05M000337 6.1e-42 173.7 166 57.2
Solyc04g009260.3 Solanum lycopersicum HOM05M000082 ORTHO05M000337 2.4e-38 161.8 162 56.2
Solyc04g009110.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 9.5e-35 149.8 157 53.5
Solyc04g009150.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 9.5e-35 149.8 161 55.3
Solyc07g039390.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 8.0e-34 146.7 142 57.7
Solyc04g009130.4 Solanum lycopersicum HOM05M000082 ORTHO05M000337 1.2e-32 142.9 148 52.7
Solyc04g009250.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 2.8e-31 138.3 160 52.5
Solyc04g009090.2 Solanum lycopersicum HOM05M000007 ORTHO05M000010 1.1e-27 126.3 158 49.4
Solyc04g025820.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 3.4e-16 88.2 62 67.7
MBI15_g31914_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 5.8e-16 87.4 124 40.3
Solyc04g009120.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.4e-14 82.8 80 56.2
MBI14_g29549_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.4e-14 82.0 125 37.6
MBI15_g25905_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.4e-14 82.0 142 36.6
MBI15_g34441_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.2e-14 81.6 135 35.6
p5.00_sc00282_p0014 Elaeis guineensis HOM05M000082 ORTHO05M012860 5.4e-14 80.9 134 37.3
MBI15_g47075_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 5.4e-14 80.9 132 38.6
Glyma.18G269500 Glycine max HOM05M000082 ORTHO05M000337 9.2e-14 80.1 123 36.6
Glyma.08G247932 Glycine max HOM05M000082 ORTHO05M000337 3.5e-13 78.2 118 36.4
MBI15_g37108_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 6.0e-13 77.4 125 36.8
MBI15_g16382_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.3e-12 76.3 131 36.6
MBI15_g25902_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.3e-12 76.3 120 37.5
MBI15_g35994_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.0e-12 75.1 131 34.4
MBI15_g20153_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.5e-11 72.8 120 36.7
MBI15_g37110_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.9e-11 72.4 128 35.9
MBI15_g12254_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.5e-11 72.0 120 36.7
MBI15_g25906_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.5e-11 72.0 132 37.1
DDU473G0261 Dioscorea dumetorum HOM05M000082 ORTHO05M000337 7.3e-11 70.5 131 33.6
MBI15_g06336_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 7.3e-11 70.5 124 37.1
MBI15_g43333_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 9.5e-11 70.1 119 34.5
p5.00_sc00282_p0011 Elaeis guineensis HOM05M000082 ORTHO05M012860 1.2e-10 69.7 140 34.3
MBI14_g44939_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.2e-10 69.7 116 36.2
Solyc12g094660.2 Solanum lycopersicum HOM05M000082 ORTHO05M021565 1.2e-10 69.7 125 35.2
MBI15_g00938_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.6e-10 69.3 120 35.0
MBI15_g32225_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.6e-10 69.3 123 35.8
MBI15_g34019_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.6e-10 69.3 120 35.0
MBI15_g46865_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.6e-10 69.3 120 36.7
MBI15_g06352_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.8e-10 68.6 153 35.9
Spipo12G0027900 Spirodela polyrhiza HOM05M000082 ORTHO05M000337 2.8e-10 68.6 136 32.4
MBI14_g01385_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.6e-10 68.2 114 34.2
MBI15_g16861_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.6e-10 68.2 120 36.7
MBI15_g20152_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.6e-10 68.2 120 35.0
MBI08_g28972_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 4.7e-10 67.8 124 35.5
MBI15_g09157_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 6.2e-10 67.4 130 35.4
MBI15_g29733_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 6.2e-10 67.4 120 35.0
AT1G58602 Arabidopsis thaliana HOM05M000082 ORTHO05M000337 8.1e-10 67.0 102 35.3
MBI14_g00923_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 8.1e-10 67.0 119 34.5
MBI14_g44938_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 8.1e-10 67.0 124 31.5
MBI15_g25574_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 8.1e-10 67.0 112 37.5
MBI15_g39785_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000127 8.1e-10 67.0 120 34.2
MBI15_g43352_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.1e-09 66.6 130 35.4
MBI15_g19201_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.4e-09 66.2 115 35.7
ATR0691G019 Amborella trichopoda HOM05M000082 ORTHO05M027841 2.3e-09 65.5 119 35.3
CALSI_Maker00028745 Calamus simplicifolius HOM05M000082 ORTHO05M000337 2.3e-09 65.5 103 36.9
MBI14_g01383_MAGBIO Magnolia biondii HOM05M000377 ORTHO05M000484 2.3e-09 65.5 119 32.8
MBI15_g29732_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.1e-09 65.1 120 34.2
CALSI_Maker00017407 Calamus simplicifolius HOM05M000082 ORTHO05M000337 5.2e-09 64.3 103 35.9
Glyma.10G196750 Glycine max HOM05M000082 ORTHO05M117368 5.2e-09 64.3 101 33.7
MBI15_g44606_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 5.2e-09 64.3 120 35.8
Spipo12G0028700 Spirodela polyrhiza HOM05M000082 ORTHO05M000337 8.9e-09 63.5 139 28.1
AT1G58807 Arabidopsis thaliana HOM05M000082 ORTHO05M000337 1.2e-08 63.2 94 37.2
AT1G59124 Arabidopsis thaliana HOM05M000082 ORTHO05M000337 1.2e-08 63.2 94 37.2
MBI15_g43351_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.2e-08 63.2 129 35.7
CALSI_Maker00028742 Calamus simplicifolius HOM05M000007 ORTHO05M000337 1.5e-08 62.8 103 35.9
MBI14_g01379_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.5e-08 62.8 105 37.1
MBI15_g25305_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.0e-08 62.4 130 33.1
MBI15_g36993_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.0e-08 62.4 120 33.3
AT1G58848 Arabidopsis thaliana HOM05M000082 ORTHO05M000337 3.4e-08 61.6 94 36.2
AT1G59218 Arabidopsis thaliana HOM05M000082 ORTHO05M000337 3.4e-08 61.6 94 36.2
MBI14_g00924_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.4e-08 61.6 119 32.8
p5.00_sc00055_p0052 Elaeis guineensis HOM05M000082 ORTHO05M000337 4.4e-08 61.2 103 35.0
Glyma.20G193500 Glycine max HOM05M000082 ORTHO05M119998 4.4e-08 61.2 94 34.0
MBI14_g30659_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 4.4e-08 61.2 138 31.2
MBI10_g00736_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 5.8e-08 60.8 130 34.6
MBI14_g42476_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000127 5.8e-08 60.8 124 30.6
CALSI_Maker00005257 Calamus simplicifolius HOM05M000082 ORTHO05M000337 9.9e-08 60.1 103 35.0
CALSI_Maker00013102 Calamus simplicifolius HOM05M000082 ORTHO05M000337 9.9e-08 60.1 103 35.0
MBI14_g34255_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000127 9.9e-08 60.1 119 31.1
MBI15_g02252_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.3e-07 59.7 120 32.5
MBI15_g14740_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.2e-07 58.9 112 36.6
Potri.012G083700 Populus trichocarpa HOM05M000082 ORTHO05M000337 2.2e-07 58.9 113 35.4
AT5G48620 Arabidopsis thaliana HOM05M000082 ORTHO05M000337 2.9e-07 58.5 121 28.9
MBI14_g40170_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 2.9e-07 58.5 113 35.4
Ma07_g21740 Musa acuminata HOM05M000082 ORTHO05M000337 2.9e-07 58.5 117 29.1
p5.00_sc00025_p0158 Elaeis guineensis HOM05M000082 ORTHO05M000337 3.7e-07 58.2 143 30.1
MBI15_g26847_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.7e-07 58.2 90 37.8
MBI15_g43334_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 3.7e-07 58.2 119 34.5
MBI15_g38126_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 4.9e-07 57.8 120 33.3
AT5G43470 Arabidopsis thaliana HOM05M000082 ORTHO05M000337 6.4e-07 57.4 141 25.5
MBI15_g29721_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 6.4e-07 57.4 120 33.3
CALSI_Maker00037932 Calamus simplicifolius HOM05M000082 ORTHO05M002441 8.3e-07 57.0 109 30.3
MBI14_g02345_MAGBIO Magnolia biondii HOM05M000007 ORTHO05M000127 8.3e-07 57.0 121 29.8
MBI14_g15201_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 1.1e-06 56.6 124 33.9
Glyma.20G195400 Glycine max HOM05M000082 ORTHO05M116259 1.4e-06 56.2 102 31.4
TraesCS7B03G1299100 Triticum aestivum HOM05M000105 ORTHO05M010326 1.9e-06 55.8 91 35.2
MBI15_g35155_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000127 2.4e-06 55.5 103 35.0
p5.00_sc00087_p0027 Elaeis guineensis HOM05M000007 ORTHO05M000127 3.2e-06 55.1 124 31.5
AET7Gv21343700 Aegilops tauschii HOM05M000105 ORTHO05M010326 4.1e-06 54.7 91 34.1
V3.Lp_chr7_0.1G10366 Lolium perenne HOM05M000082 ORTHO05M012860 4.1e-06 54.7 136 31.6
TraesCS7D03G1287900 Triticum aestivum HOM05M000105 ORTHO05M010326 4.1e-06 54.7 91 34.1
MBI14_g30655_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000337 5.4e-06 54.3 124 33.1
GWHGASIY002826 Secale cereale HOM05M000105 ORTHO05M010326 5.4e-06 54.3 91 34.1
TraesCS7A03G1359000 Triticum aestivum HOM05M000105 ORTHO05M010326 5.4e-06 54.3 91 34.1
TRIDC7AG077360 Triticum dicoccoides HOM05M000105 ORTHO05M010326 5.4e-06 54.3 91 34.1
Aco030471 Ananas comosus HOM05M000082 ORTHO05M000127 7.1e-06 53.9 129 29.5
MBI15_g22635_MAGBIO Magnolia biondii HOM05M000082 ORTHO05M000127 7.1e-06 53.9 103 34.0
Misin19G274700 Miscanthus sinensis HOM05M000105 ORTHO05M010326 7.1e-06 53.9 91 34.1
TraesCS7D03G1296200 Triticum aestivum HOM05M000082 ORTHO05M000337 7.1e-06 53.9 109 30.3
TRITD7Av1G278400 Triticum turgidum HOM05M000105 ORTHO05M010326 7.1e-06 53.9 91 34.1
TRITD7Bv1G231520 Triticum turgidum HOM05M000105 ORTHO05M010326 7.1e-06 53.9 91 34.1
V3.Lp_chr7_0.1G12566 Lolium perenne HOM05M000105 ORTHO05M010326 9.2e-06 53.5 91 33.0
GWHGASIY036096 Secale cereale HOM05M000082 ORTHO05M000337 9.2e-06 53.5 110 30.9
Spipo12G0023200 Spirodela polyrhiza HOM05M000082 ORTHO05M000337 9.2e-06 53.5 105 30.5
TRITD7Bv1G232760 Triticum turgidum HOM05M000082 ORTHO05M000337 9.2e-06 53.5 110 31.8


User provided reference genes

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