Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g024560.3 Solanum lycopersicum HOM05M001177 ORTHO05M014919 4.8e-85 317.0 158 100.0
Solyc00g500037.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.0e-39 166.4 157 61.8
Solyc00g500046.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.0e-39 166.4 157 61.8
Solyc00g500081.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.0e-39 166.4 157 61.8
Solyc00g500128.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.0e-39 166.4 157 61.8
Solyc00g500198.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.0e-39 166.4 157 61.8
Solyc00g500327.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.0e-39 166.4 157 61.8
Solyc10g012230.1 Solanum lycopersicum HOM05M001177 ORTHO05M014919 4.9e-37 157.5 157 59.2
Potri.013G143400 Populus trichocarpa HOM05M001177 ORTHO05M001237 2.4e-36 155.2 157 57.3
Aco025943 Ananas comosus HOM05M001177 ORTHO05M001237 1.6e-35 152.5 157 56.1
ATCG00860 Arabidopsis thaliana HOM05M001177 ORTHO05M001237 4.6e-35 151.0 158 57.6
ATCG01280 Arabidopsis thaliana HOM05M001177 ORTHO05M001237 4.6e-35 151.0 158 57.6
Solyc12g036000.1 Solanum lycopersicum HOM05M001177 ORTHO05M014919 1.1e-31 139.8 100 75.0
Asa0G02611 Allium sativum HOM05M001177 ORTHO05M001237 8.9e-31 136.7 96 75.0
Asa4G03323 Allium sativum HOM05M001177 ORTHO05M001237 8.9e-31 136.7 155 52.3
Asa6G03513 Allium sativum HOM05M001177 ORTHO05M001237 8.9e-31 136.7 96 75.0
MBI05_g05343_MAGBIO Magnolia biondii HOM05M001177 ORTHO05M009047 3.4e-30 134.8 90 78.9
Solyc09g031800.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 7.1e-20 100.5 61 83.6
Solyc03g020090.1 Solanum lycopersicum HOM05M001177 ORTHO05M014919 1.0e-18 96.7 61 78.7
DDU197G0012 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 7.3e-17 90.5 59 76.3
Solyc01g017060.2 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.6e-16 89.4 61 77.0
Solyc05g026320.1 Solanum lycopersicum HOM05M001177 ORTHO05M014919 4.7e-16 87.8 61 70.5
Asa3G05072 Allium sativum HOM05M001177 ORTHO05M001237 6.2e-16 87.4 59 74.6
Aco028538 Ananas comosus HOM05M001177 ORTHO05M001237 1.1e-12 76.6 51 74.5
Potri.005G154512 Populus trichocarpa HOM05M001177 ORTHO05M014919 1.2e-11 73.2 101 45.5
Glyma.20G045200 Glycine max HOM05M001177 ORTHO05M014919 1.7e-10 69.3 96 51.0
Solyc06g048990.1 Solanum lycopersicum HOM05M001177 ORTHO05M014919 2.3e-10 68.9 50 74.0
DDU125G0004 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU125G0009 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU125G0023 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU125G0027 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU524G0221 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU581G0024 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU643G0057 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU643G0124 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU688G0010 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU688G0026 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
DDU747G0016 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 1.5e-09 66.2 43 74.4
Solyc02g011970.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.6e-06 55.5 51 58.8


User provided reference genes

Program Settings