Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g026418.1 Solanum lycopersicum HOM05M003249 ORTHO05M249178 9.7e-38 158.7 70 100.0
Solyc12g098823.1 Solanum lycopersicum HOM05M003249 ORTHO05M248666 5.7e-30 132.9 93 67.7
Solyc01g008473.1 Solanum lycopersicum HOM05M003249 ORTHO05M252778 4.8e-29 129.8 93 66.7
Solyc05g053133.1 Solanum lycopersicum HOM05M003249 ORTHO05M252522 4.8e-29 129.8 93 67.7
Solyc01g150104.1 Solanum lycopersicum HOM05M003249 ORTHO05M247524 6.3e-29 129.4 93 63.4
Solyc12g098827.1 Solanum lycopersicum HOM05M003249 ORTHO05M252432 6.3e-29 129.4 93 65.6
Solyc09g098603.1 Solanum lycopersicum HOM05M003249 ORTHO05M250993 1.1e-28 128.6 93 64.5
Solyc08g007715.1 Solanum lycopersicum HOM05M003249 ORTHO05M252415 3.1e-28 127.1 91 65.9
Solyc01g150105.1 Solanum lycopersicum HOM05M003249 ORTHO05M248203 2.6e-27 124.0 93 64.5
Solyc01g150107.1 Solanum lycopersicum HOM05M003249 ORTHO05M247923 2.6e-27 124.0 120 53.3
Solyc00g500379.1 Solanum lycopersicum HOM05M003249 ORTHO05M249304 5.9e-27 122.9 93 63.4
Solyc00g500387.1 Solanum lycopersicum HOM05M003249 ORTHO05M251472 5.9e-27 122.9 93 62.4
Solyc01g008477.1 Solanum lycopersicum HOM05M003249 ORTHO05M249306 5.9e-27 122.9 93 61.3
Solyc05g021405.1 Solanum lycopersicum HOM05M003249 ORTHO05M249705 1.3e-26 121.7 93 63.4
Solyc10g150100.1 Solanum lycopersicum HOM05M003249 ORTHO05M250207 1.7e-26 121.3 93 63.4
Solyc04g150100.1 Solanum lycopersicum HOM05M003249 ORTHO05M252008 2.2e-26 120.9 89 64.0
Solyc05g006605.1 Solanum lycopersicum HOM05M003249 ORTHO05M248480 2.2e-26 120.9 88 65.9
Solyc05g004003.1 Solanum lycopersicum HOM05M003249 ORTHO05M249475 3.8e-26 120.2 89 66.3
Solyc05g021415.1 Solanum lycopersicum HOM05M003249 ORTHO05M250552 3.8e-26 120.2 93 62.4
Solyc12g150128.1 Solanum lycopersicum HOM05M003249 ORTHO05M247997 5.0e-26 119.8 92 64.1
Solyc03g006712.1 Solanum lycopersicum HOM05M003249 ORTHO05M248345 6.5e-26 119.4 89 64.0
Solyc01g008479.1 Solanum lycopersicum HOM05M003249 ORTHO05M252837 1.5e-25 118.2 92 64.1
Solyc12g150100.1 Solanum lycopersicum HOM05M003249 ORTHO05M248764 1.5e-25 118.2 82 67.1
Solyc01g009305.1 Solanum lycopersicum HOM05M003249 ORTHO05M249756 4.2e-25 116.7 93 61.3
Solyc06g004005.1 Solanum lycopersicum HOM05M003249 ORTHO05M247704 4.2e-25 116.7 93 61.3
Solyc09g098604.1 Solanum lycopersicum HOM05M003249 ORTHO05M248282 9.4e-25 115.5 93 61.3
Solyc09g009587.1 Solanum lycopersicum HOM05M003249 ORTHO05M251191 1.2e-24 115.2 93 62.4
Solyc09g009173.1 Solanum lycopersicum HOM05M003249 ORTHO05M247841 2.1e-24 114.4 85 63.5
Solyc08g069236.1 Solanum lycopersicum HOM05M003249 ORTHO05M250624 2.7e-24 114.0 88 63.6
Solyc09g005135.1 Solanum lycopersicum HOM05M003249 ORTHO05M247365 3.6e-24 113.6 134 45.5
Solyc12g150102.1 Solanum lycopersicum HOM05M003249 ORTHO05M251636 3.6e-24 113.6 88 63.6
Solyc03g006714.1 Solanum lycopersicum HOM05M003249 ORTHO05M249989 1.0e-23 112.1 88 62.5
Solyc10g086783.1 Solanum lycopersicum HOM05M003249 ORTHO05M249733 1.4e-23 111.7 88 60.2
Solyc03g006718.1 Solanum lycopersicum HOM05M003249 ORTHO05M250786 2.3e-23 110.9 91 59.3
Solyc00g500283.1 Solanum lycopersicum HOM05M003249 ORTHO05M252373 6.7e-23 109.4 93 58.1
Solyc11g004005.1 Solanum lycopersicum HOM05M003249 ORTHO05M248417 6.7e-23 109.4 93 57.0
Solyc03g006907.1 Solanum lycopersicum HOM05M003249 ORTHO05M250936 1.2e-22 108.6 126 46.8
Solyc03g004007.1 Solanum lycopersicum HOM05M003249 ORTHO05M247793 6.3e-21 102.8 113 49.6
Solyc00g500246.1 Solanum lycopersicum HOM05M003249 ORTHO05M250736 4.1e-20 100.1 65 69.2
Solyc04g075018.1 Solanum lycopersicum HOM05M003249 ORTHO05M249781 5.3e-20 99.8 76 61.8
Solyc04g011333.1 Solanum lycopersicum HOM05M003249 ORTHO05M250694 7.0e-20 99.4 88 58.0
Solyc08g004005.1 Solanum lycopersicum HOM05M003249 ORTHO05M251035 1.6e-19 98.2 104 48.1
Solyc01g004008.1 Solanum lycopersicum HOM05M003249 ORTHO05M248400 2.0e-19 97.8 139 42.4
Solyc03g061653.1 Solanum lycopersicum HOM05M003249 ORTHO05M247804 2.7e-19 97.4 88 56.8
Solyc01g008475.1 Solanum lycopersicum HOM05M003249 ORTHO05M249044 4.5e-19 96.7 81 60.5
Solyc03g005393.1 Solanum lycopersicum HOM05M003249 ORTHO05M249058 5.9e-19 96.3 131 41.2
Solyc05g004007.1 Solanum lycopersicum HOM05M003249 ORTHO05M251828 1.0e-18 95.5 77 58.4
Solyc06g004000.1 Solanum lycopersicum HOM05M003249 ORTHO05M252355 1.9e-17 91.3 92 51.1
Solyc00g500377.1 Solanum lycopersicum HOM05M003249 ORTHO05M252878 2.5e-17 90.9 41 95.1
Solyc00g500122.1 Solanum lycopersicum HOM05M003249 ORTHO05M251590 2.7e-16 87.4 53 73.6
Solyc00g500269.1 Solanum lycopersicum HOM05M003249 ORTHO05M249721 2.7e-16 87.4 68 64.7
Solyc01g004002.1 Solanum lycopersicum HOM05M003249 ORTHO05M250956 2.7e-16 87.4 76 59.2
Solyc08g004000.1 Solanum lycopersicum HOM05M003249 ORTHO05M249190 2.7e-16 87.4 71 59.2
Solyc04g004000.1 Solanum lycopersicum HOM05M003249 ORTHO05M248176 3.6e-16 87.0 41 90.2
Solyc10g080782.1 Solanum lycopersicum HOM05M003249 ORTHO05M249112 4.7e-16 86.7 41 90.2
Solyc04g004005.1 Solanum lycopersicum HOM05M003249 ORTHO05M252198 8.0e-16 85.9 69 62.3
Solyc03g124061.1 Solanum lycopersicum HOM05M003249 ORTHO05M247935 1.0e-15 85.5 129 40.3
Solyc06g150122.1 Solanum lycopersicum HOM05M003249 ORTHO05M252511 1.4e-15 85.1 175 32.6
Solyc00g500386.1 Solanum lycopersicum HOM05M003249 ORTHO05M248543 6.8e-15 82.8 64 60.9
Solyc03g006715.2 Solanum lycopersicum HOM05M003249 ORTHO05M247496 4.4e-14 80.1 66 59.1
Solyc04g075014.1 Solanum lycopersicum HOM05M003249 ORTHO05M251117 4.4e-14 80.1 65 58.5
Solyc04g075012.1 Solanum lycopersicum HOM05M003249 ORTHO05M252265 1.3e-13 78.6 64 60.9
Solyc00g500180.1 Solanum lycopersicum HOM05M003249 ORTHO05M248809 1.7e-13 78.2 53 67.9
Solyc01g004006.1 Solanum lycopersicum HOM05M003249 ORTHO05M248001 1.7e-13 78.2 41 82.9
Solyc03g061657.1 Solanum lycopersicum HOM05M003249 ORTHO05M251204 2.2e-13 77.8 48 75.0
Solyc07g007335.1 Solanum lycopersicum HOM05M003249 ORTHO05M248002 5.4e-12 73.2 40 77.5
Solyc03g006365.1 Solanum lycopersicum HOM05M003249 ORTHO05M250289 2.7e-11 70.9 84 42.9
Solyc04g064958.1 Solanum lycopersicum HOM05M003249 ORTHO05M247295 2.7e-11 70.9 41 80.5
Solyc03g006716.1 Solanum lycopersicum HOM05M003249 ORTHO05M251128 3.5e-11 70.5 65 53.8
Solyc08g069237.1 Solanum lycopersicum HOM05M003249 ORTHO05M249476 3.5e-11 70.5 74 51.4
Solyc08g069238.1 Solanum lycopersicum HOM05M003249 ORTHO05M250294 4.5e-11 70.1 65 53.8
Solyc00g500235.1 Solanum lycopersicum HOM05M003249 ORTHO05M251870 5.9e-11 69.7 65 52.3
Solyc11g073315.1 Solanum lycopersicum HOM05M003249 ORTHO05M249427 1.3e-10 68.6 68 50.0
Solyc00g500270.1 Solanum lycopersicum HOM05M003249 ORTHO05M250303 1.9e-09 64.7 28 92.9
Solyc12g150129.1 Solanum lycopersicum HOM05M003249 ORTHO05M249622 1.9e-09 64.7 28 92.9
Solyc09g004000.1 Solanum lycopersicum HOM05M003249 ORTHO05M252199 3.2e-09 63.9 77 48.1
Solyc08g006255.1 Solanum lycopersicum HOM05M003249 ORTHO05M252568 4.2e-09 63.5 28 89.3
Solyc08g006257.1 Solanum lycopersicum HOM05M003249 ORTHO05M252277 4.2e-09 63.5 28 89.3
Solyc09g008087.1 Solanum lycopersicum HOM05M003249 ORTHO05M250673 4.2e-09 63.5 28 89.3
Solyc12g100363.1 Solanum lycopersicum HOM05M003249 ORTHO05M249366 5.5e-09 63.2 65 47.7
Solyc05g053137.1 Solanum lycopersicum HOM05M003249 ORTHO05M248722 7.2e-09 62.8 28 89.3
Solyc10g086785.1 Solanum lycopersicum HOM05M003249 ORTHO05M252007 7.2e-09 62.8 36 80.6
Solyc09g009583.1 Solanum lycopersicum HOM05M003249 ORTHO05M247779 1.2e-08 62.0 28 89.3
Solyc09g009734.1 Solanum lycopersicum HOM05M003249 ORTHO05M250333 1.2e-08 62.0 59 50.8
Solyc09g098606.1 Solanum lycopersicum HOM05M003249 ORTHO05M252903 1.6e-08 61.6 28 85.7
Solyc12g150130.1 Solanum lycopersicum HOM05M003249 ORTHO05M251265 1.6e-08 61.6 28 85.7
Solyc05g150105.1 Solanum lycopersicum HOM05M003249 ORTHO05M248519 2.8e-08 60.8 28 85.7
Solyc01g004000.1 Solanum lycopersicum HOM05M003249 ORTHO05M248037 6.1e-08 59.7 36 77.8
Solyc02g014876.1 Solanum lycopersicum HOM05M003249 ORTHO05M250798 6.1e-08 59.7 35 74.3
Solyc03g033295.1 Solanum lycopersicum HOM05M003249 ORTHO05M248409 6.1e-08 59.7 28 82.1
Solyc09g098605.1 Solanum lycopersicum HOM05M003249 ORTHO05M247442 1.0e-07 58.9 28 78.6
Solyc01g150106.1 Solanum lycopersicum HOM05M003249 ORTHO05M252174 1.8e-07 58.2 28 82.1
Solyc10g086787.1 Solanum lycopersicum HOM05M003249 ORTHO05M252091 1.8e-07 58.2 28 82.1
Solyc07g049805.1 Solanum lycopersicum HOM05M003249 ORTHO05M251322 3.0e-07 57.4 64 48.4
Solyc03g006903.1 Solanum lycopersicum HOM05M003249 ORTHO05M247475 8.8e-07 55.8 28 85.7
Solyc00g500282.1 Solanum lycopersicum HOM05M003249 ORTHO05M248296 3.4e-06 53.9 28 78.6
Solyc05g021410.3 Solanum lycopersicum HOM05M003249 ORTHO05M250825 4.4e-06 53.5 30 73.3
Solyc00g500356.1 Solanum lycopersicum HOM05M003249 ORTHO05M252770 5.7e-06 53.1 28 75.0
Solyc00g500366.1 Solanum lycopersicum HOM05M003249 ORTHO05M250947 5.7e-06 53.1 28 75.0
Solyc00g500367.1 Solanum lycopersicum HOM05M003249 ORTHO05M249236 5.7e-06 53.1 28 75.0
Solyc00g500385.1 Solanum lycopersicum HOM05M003249 ORTHO05M251750 7.5e-06 52.8 28 82.1


User provided reference genes

Program Settings