Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g014740.2 Solanum lycopersicum HOM05M026021 ORTHO05M013178 3.4e-121 437.6 223 100.0
Solyc02g014750.2 Solanum lycopersicum HOM05M026021 ORTHO05M013178 1.0e-80 303.1 158 95.6
Potri.001G293900 Populus trichocarpa HOM05M001706 ORTHO05M003390 7.9e-09 64.3 123 32.5
AT4G00610 Arabidopsis thaliana HOM05M001706 ORTHO05M013178 1.4e-08 63.5 116 30.2
MBI18_g24145_MAGBIO Magnolia biondii HOM05M001706 ORTHO05M003390 1.4e-08 63.5 153 28.8
Spipo4G0026900 Spirodela polyrhiza HOM05M001706 ORTHO05M003390 2.0e-07 59.7 114 33.3
evm.TU.AsparagusV1_03.2865.V1.1 Asparagus officinalis HOM05M001706 ORTHO05M003390 3.3e-07 58.9 117 31.6
CALSI_Maker00012709 Calamus simplicifolius HOM05M001706 ORTHO05M001998 5.7e-07 58.2 100 31.0
Glyma.15G063300 Glycine max HOM05M001706 ORTHO05M003390 5.7e-07 58.2 96 31.2
AT4G00390 Arabidopsis thaliana HOM05M001706 ORTHO05M003390 7.4e-07 57.8 169 24.3
AT1G61730 Arabidopsis thaliana HOM05M001706 ORTHO05M003390 9.7e-07 57.4 108 29.6
AT2G01370 Arabidopsis thaliana HOM05M001706 ORTHO05M013178 1.3e-06 57.0 97 32.0
Solyc07g052760.3 Solanum lycopersicum HOM05M013914 ORTHO05M003390 1.3e-06 57.0 130 33.1
CDE05G1513 Ceratophyllum demersum HOM05M030314 ORTHO05M003390 1.7e-06 56.6 98 33.7
Glyma.05G088300 Glycine max HOM05M004481 ORTHO05M003390 1.7e-06 56.6 128 27.3
Spipo23G0001100 Spirodela polyrhiza HOM05M001706 ORTHO05M001998 1.7e-06 56.6 110 30.0
evm.TU.AsparagusV1_01.1945.V1.1 Asparagus officinalis HOM05M026021 ORTHO05M013178 2.2e-06 56.2 121 33.9
p5.00_sc00005_p0048 Elaeis guineensis HOM05M004481 ORTHO05M003390 2.2e-06 56.2 158 26.6
Potri.009G088400 Populus trichocarpa HOM05M001706 ORTHO05M003390 2.2e-06 56.2 152 28.3
p5.00_sc02620_p0001 Elaeis guineensis HOM05M001706 ORTHO05M001998 2.8e-06 55.8 100 32.0
Spipo8G0010500 Spirodela polyrhiza HOM05M001706 ORTHO05M003390 2.8e-06 55.8 96 33.3
evm.TU.AsparagusV1_03.1936.V1.1 Asparagus officinalis HOM05M004481 ORTHO05M003390 3.7e-06 55.5 145 31.0
p5.00_sc00060_p0104 Elaeis guineensis HOM05M001706 ORTHO05M001998 3.7e-06 55.5 100 30.0
Solyc07g052830.4 Solanum lycopersicum HOM05M013914 ORTHO05M003390 6.3e-06 54.7 60 41.7
AT5G14280 Arabidopsis thaliana HOM05M001706 ORTHO05M003390 8.2e-06 54.3 104 29.8
CALSI_Maker00019172 Calamus simplicifolius HOM05M001706 ORTHO05M001998 8.2e-06 54.3 100 30.0
Glyma.19G242600 Glycine max HOM05M001706 ORTHO05M001998 8.2e-06 54.3 96 35.4

Aegilops tauschii (0 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (0 genes)
Glycine max (3 genes)
Hordeum vulgare (0 genes)
Lolium perenne (0 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza alta (0 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (0 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (0 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (0 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (0 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings