Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g067160.4 Solanum lycopersicum HOM05M000181 ORTHO05M012208 1.1e-107 392.5 194 100.0
Solyc12g044200.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 9.2e-54 213.4 175 65.7
Solyc04g005550.2 Solanum lycopersicum HOM05M000181 ORTHO05M012208 8.6e-52 206.8 179 64.8
Solyc07g044785.1 Solanum lycopersicum HOM05M000181 ORTHO05M012208 5.8e-48 194.1 171 65.5
Solyc12g044170.1 Solanum lycopersicum HOM05M000181 ORTHO05M012208 3.7e-47 191.4 175 61.1
Solyc04g005540.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 1.1e-46 189.9 176 59.1
Solyc02g036280.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 4.3e-43 177.9 177 57.1
Solyc12g044190.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 5.4e-38 161.0 139 62.6
Solyc12g016220.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 2.6e-32 142.1 120 63.3
Solyc04g048910.1 Solanum lycopersicum HOM05M000181 ORTHO05M012208 3.8e-31 138.3 117 64.1
Solyc10g055060.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 2.1e-29 132.5 178 49.4
Solyc04g057840.1 Solanum lycopersicum HOM05M000181 ORTHO05M012208 4.3e-27 124.8 185 43.8
Solyc10g079020.1 Solanum lycopersicum HOM05M000181 ORTHO05M012208 2.9e-23 112.1 96 67.7
Solyc10g055080.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 3.2e-22 108.6 104 58.7
Solyc10g074640.3 Solanum lycopersicum HOM05M000181 ORTHO05M012208 1.2e-21 106.7 137 51.1
Solyc10g055120.1 Solanum lycopersicum HOM05M000181 ORTHO05M012208 5.1e-20 101.3 89 60.7
Solyc10g054960.1 Solanum lycopersicum HOM05M000181 ORTHO05M012208 2.7e-13 79.0 65 61.5
Potri.005G041101 Populus trichocarpa HOM05M000181 ORTHO05M011099 6.7e-12 74.3 153 35.9
Potri.005G042400 Populus trichocarpa HOM05M000181 ORTHO05M011099 2.5e-11 72.4 153 35.9
Glyma.07G065500 Glycine max HOM05M000181 ORTHO05M011099 3.3e-11 72.0 172 32.0
Potri.019G036875 Populus trichocarpa HOM05M000181 ORTHO05M011099 4.3e-11 71.6 131 35.9
ATR0665G146 Amborella trichopoda HOM05M000181 ORTHO05M000177 7.4e-11 70.9 126 34.9
Glyma.18G226850 Glycine max HOM05M000181 ORTHO05M011099 9.6e-11 70.5 197 29.9
Potri.005G061860 Populus trichocarpa HOM05M000181 ORTHO05M011099 9.6e-11 70.5 168 33.9
Glyma.18G226500 Glycine max HOM05M000181 ORTHO05M011099 6.2e-10 67.8 167 29.9
Potri.005G062130 Populus trichocarpa HOM05M000181 ORTHO05M011099 8.1e-10 67.4 140 35.7
Glyma.16G031700 Glycine max HOM05M000181 ORTHO05M011099 2.4e-09 65.9 130 34.6
Glyma.15G247300 Glycine max HOM05M000181 ORTHO05M011099 3.1e-09 65.5 133 30.8
MBI11_g13896_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 4.0e-09 65.1 139 33.8
Glyma.07G078100 Glycine max HOM05M000181 ORTHO05M011099 6.9e-09 64.3 133 31.6
Potri.001G446650 Populus trichocarpa HOM05M000181 ORTHO05M000177 9.0e-09 63.9 184 27.2
Glyma.13G260600 Glycine max HOM05M000181 ORTHO05M000177 2.0e-08 62.8 106 33.0
MBI11_g07701_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 2.0e-08 62.8 140 33.6
Glyma.07G063300 Glycine max HOM05M000181 ORTHO05M011099 2.6e-08 62.4 131 28.2
Glyma.07G065000 Glycine max HOM05M000181 ORTHO05M011099 2.6e-08 62.4 170 30.0
Glyma.07G065600 Glycine max HOM05M000181 ORTHO05M011099 2.6e-08 62.4 178 28.7
Potri.013G027300 Populus trichocarpa HOM05M000181 ORTHO05M011099 2.6e-08 62.4 112 34.8
MBI11_g25848_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 4.5e-08 61.6 139 33.1
MBI11_g42046_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 4.5e-08 61.6 139 33.1
MBI18_g20624_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 7.6e-08 60.8 126 36.5
Glyma.01G072300 Glycine max HOM05M000181 ORTHO05M011099 1.0e-07 60.5 134 32.1
Glyma.15G247600 Glycine max HOM05M000181 ORTHO05M011099 1.0e-07 60.5 106 34.9
Glyma.16G031600 Glycine max HOM05M000181 ORTHO05M011099 1.7e-07 59.7 131 36.6
MBI04_g40434_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 1.7e-07 59.7 92 33.7
ATR0037G066 Amborella trichopoda HOM05M000181 ORTHO05M000177 2.2e-07 59.3 118 30.5
evm.TU.AsparagusV1_07.3893.V1.1 Asparagus officinalis HOM05M014069 ORTHO05M013909 2.2e-07 59.3 165 29.7
Glyma.12G236500 Glycine max HOM05M000181 ORTHO05M000177 2.2e-07 59.3 116 28.4
MBI11_g05442_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 2.2e-07 59.3 137 32.1
MBI18_g07589_MAGBIO Magnolia biondii HOM05M000341 ORTHO05M004138 2.2e-07 59.3 133 28.6
evm.TU.AsparagusV1_07.3895.V1.1 Asparagus officinalis HOM05M014069 ORTHO05M013909 4.9e-07 58.2 165 29.7
MBI04_g30393_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 4.9e-07 58.2 92 32.6
MBI05_g36586_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 4.9e-07 58.2 133 30.8
Potri.005G042900 Populus trichocarpa HOM05M000181 ORTHO05M011099 4.9e-07 58.2 133 30.1
ATR0618G196 Amborella trichopoda HOM05M000181 ORTHO05M000177 6.5e-07 57.8 123 32.5
MBI16_g26402_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 6.5e-07 57.8 122 28.7
Potri.T012000 Populus trichocarpa HOM05M000181 ORTHO05M000177 8.4e-07 57.4 106 32.1
MBI18_g45951_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 1.1e-06 57.0 146 32.2
Glyma.18G281700 Glycine max HOM05M001006 ORTHO05M000907 1.9e-06 56.2 113 29.2
MBI11_g05461_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 1.9e-06 56.2 167 28.7
MBI18_g37841_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 1.9e-06 56.2 94 33.0
Potri.001G427210 Populus trichocarpa HOM05M000181 ORTHO05M000177 1.9e-06 56.2 148 27.7
MBI11_g05445_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 2.5e-06 55.8 140 32.1
p5.00_sc00160_p0018 Elaeis guineensis HOM05M013355 ORTHO05M000177 3.2e-06 55.5 124 27.4
MBI04_g29468_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 4.2e-06 55.1 92 30.4
MBI11_g05438_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 4.2e-06 55.1 136 30.9
ATR1120G092 Amborella trichopoda HOM05M000181 ORTHO05M000177 5.5e-06 54.7 118 28.8
MBI02_g10558_MAGBIO Magnolia biondii HOM05M000181 ORTHO05M000177 7.1e-06 54.3 90 32.2
Potri.019G013140 Populus trichocarpa HOM05M000181 ORTHO05M000177 7.1e-06 54.3 144 28.5
TRIDC3BG053060 Triticum dicoccoides HOM05M000181 ORTHO05M000177 7.1e-06 54.3 151 30.5
TRITD3Bv1G229460 Triticum turgidum HOM05M000181 ORTHO05M000177 7.1e-06 54.3 151 30.5
Asa6G02377 Allium sativum HOM05M014069 ORTHO05M013909 9.3e-06 53.9 176 27.3
Glyma.01G072400 Glycine max HOM05M000181 ORTHO05M011099 9.3e-06 53.9 129 31.0


User provided reference genes

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