Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g065640.3 Solanum lycopersicum HOM05M001115 ORTHO05M005454 9.8e-36 152.1 76 100.0
Bradi2g13077 Brachypodium distachyon HOM05M001115 ORTHO05M005454 1.8e-13 78.2 60 68.3
MBI10_g47590_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M005454 3.1e-13 77.4 60 66.7
GWHGASIY019870 Secale cereale HOM05M001115 ORTHO05M005454 4.0e-13 77.0 60 66.7
TraesCS3B03G0454200 Triticum aestivum HOM05M001115 ORTHO05M005454 4.0e-13 77.0 60 66.7
TRIDC3AG037480 Triticum dicoccoides HOM05M001115 ORTHO05M005454 4.0e-13 77.0 60 66.7
V3.Lp_chr7_0.1G8392 Lolium perenne HOM05M001115 ORTHO05M005454 1.2e-12 75.5 60 63.3
V3.Lp_scaffold_4559G18 Lolium perenne HOM05M001115 ORTHO05M005454 1.2e-12 75.5 60 63.3
V3.Lp_scaffold_4807G16 Lolium perenne HOM05M001115 ORTHO05M005454 1.2e-12 75.5 60 63.3
V3.Lp_scaffold_891G6 Lolium perenne HOM05M001115 ORTHO05M005454 1.2e-12 75.5 60 63.3
Pahal.3G034100 Panicum hallii HOM05M001115 ORTHO05M005454 1.5e-12 75.1 60 66.7
OsKitaake06g252800 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 2.6e-12 74.3 60 66.7
OsKitaake07g111000 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 2.6e-12 74.3 60 66.7
OsKitaake10g165814 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 2.6e-12 74.3 60 66.7
OsKitaake10g165832 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 2.6e-12 74.3 60 66.7
OsR498G0511369000.01 Oryza sativa ssp. indica HOM05M001115 ORTHO05M005454 2.6e-12 74.3 60 66.7
OsR498G0612783800.01 Oryza sativa ssp. indica HOM05M001115 ORTHO05M005454 2.6e-12 74.3 60 66.7
TRIDC7BG017830 Triticum dicoccoides HOM05M001115 ORTHO05M005454 3.4e-12 73.9 60 65.0
AET1Gv20467400 Aegilops tauschii HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 63.3
Ot_Chr7_gn38431 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
Ot_Chr7_gn38432 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
Ot_Chr7_gn38433 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
Ot_Un136_gn40169 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
Ot_Un168_gn40609 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
Ot_Un171_gn40698 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
Ot_Un3_gn40920 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
Ot_Un9_gn41210 Oropetium thomaeum HOM05M001115 ORTHO05M005454 5.8e-12 73.2 60 65.0
TRITD5Bv1G141970 Triticum turgidum HOM05M001115 ORTHO05M005454 7.6e-12 72.8 65 60.0
AET3Gv21044600 Aegilops tauschii HOM05M001115 ORTHO05M005454 1.9e-10 68.2 56 64.3
Zm00007a00022333 Zea mays B104 HOM05M001634 ORTHO05M001555 3.2e-10 67.4 53 67.9
Aco024830 Ananas comosus HOM05M001115 ORTHO05M005454 4.2e-10 67.0 51 68.6
Sevir.2G372650 Setaria viridis HOM05M001115 ORTHO05M005454 4.2e-10 67.0 60 60.0
AET1Gv20912500 Aegilops tauschii HOM05M001115 ORTHO05M005454 2.7e-09 64.3 52 65.4
Solyc02g011740.1 Solanum lycopersicum HOM05M001115 ORTHO05M005454 4.3e-07 57.0 45 66.7
MisinT203100 Miscanthus sinensis HOM05M001115 ORTHO05M005454 1.3e-06 55.5 38 71.1


User provided reference genes

Program Settings