Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0631450 Oryza sativa ssp. japonica HOM05M009992 ORTHO05M012653 1.6e-189 665.2 347 100.0
OsKitaake11g205601 Oryza sativa Kitaake HOM05M009992 ORTHO05M012653 8.1e-186 652.9 347 98.8
Ot_Chr1_gn30656 Oropetium thomaeum HOM05M009992 ORTHO05M012653 1.4e-20 104.0 199 44.7
Dexi9A01G0023210 Digitaria exilis HOM05M009992 ORTHO05M012653 2.6e-19 99.8 317 34.1
Misin11G219500 Miscanthus sinensis HOM05M009992 ORTHO05M012653 2.1e-16 90.1 244 37.3
OsR498G0409316800.01 Oryza sativa ssp. indica HOM05M009992 ORTHO05M012653 1.7e-13 80.5 222 38.7
Zm00007a00034646 Zea mays B104 HOM05M009992 ORTHO05M012653 2.8e-13 79.7 180 38.3
OsKitaake08g120400 Oryza sativa Kitaake HOM05M009992 ORTHO05M012653 9.1e-12 74.7 245 35.5
GWHGAZTO012807 Oryza alta HOM05M009992 ORTHO05M012653 4.2e-09 65.9 136 40.4
Aco020923 Ananas comosus HOM05M009992 ORTHO05M012653 7.2e-09 65.1 204 34.8
GWHGAZTO012800 Oryza alta HOM05M009992 ORTHO05M012653 2.7e-08 63.2 220 35.9
Sspon.06G0027360-1B Saccharum spontaneum HOM05M000931 ORTHO05M016271 1.4e-07 60.8 128 36.7
OsR498G0204816000.01 Oryza sativa ssp. indica HOM05M009992 ORTHO05M012653 2.3e-07 60.1 131 40.5
Os10g0427700 Oryza sativa ssp. japonica HOM05M009992 ORTHO05M012653 2.3e-07 60.1 136 38.2
V3.Lp_chr5_0G4402 Lolium perenne HOM05M000167 ORTHO05M000024 7.5e-06 55.1 134 38.8


User provided reference genes

Program Settings