Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0302900 Oryza sativa ssp. japonica HOM05M000063 ORTHO05M000063 1.2e-42 175.3 85 100.0
OsR498G0815470100.01 Oryza sativa ssp. indica HOM05M000063 ORTHO05M000063 4.6e-34 146.7 84 82.1
GWHGAZTO002363 Oryza alta HOM05M000063 ORTHO05M000063 6.7e-33 142.9 83 81.9
GWHGAZTO018134 Oryza alta HOM05M000063 ORTHO05M000063 1.5e-32 141.7 84 81.0
GWHGAZTO050635 Oryza alta HOM05M000063 ORTHO05M000063 1.9e-32 141.4 83 80.7
GWHGAZTO025945 Oryza alta HOM05M000063 ORTHO05M000063 2.5e-32 141.0 83 80.7
OsR498G0612822800.01 Oryza sativa ssp. indica HOM05M000063 ORTHO05M000063 1.6e-31 138.3 84 81.0
GWHGAZTO047177 Oryza alta HOM05M000063 ORTHO05M000063 3.7e-31 137.1 81 80.2
GWHGAZTO014950 Oryza alta HOM05M000063 ORTHO05M000063 4.8e-31 136.7 84 78.6
GWHGAZTO051049 Oryza alta HOM05M000063 ORTHO05M000063 6.3e-31 136.3 83 79.5
GWHGAZTO026987 Oryza alta HOM05M000063 ORTHO05M000063 1.4e-30 135.2 83 78.3
GWHGAZTO018702 Oryza alta HOM05M000063 ORTHO05M000063 1.8e-30 134.8 83 79.5
GWHGAZTO011972 Oryza alta HOM05M000063 ORTHO05M000063 4.1e-30 133.7 77 81.8
GWHGAZTO029263 Oryza alta HOM05M000063 ORTHO05M000063 1.2e-29 132.1 78 82.1
GWHGAZTO047971 Oryza alta HOM05M000063 ORTHO05M000063 1.3e-28 128.6 84 72.6
GWHGAZTO014108 Oryza alta HOM05M000063 ORTHO05M000063 1.7e-28 128.3 81 77.8
GWHGAZTO008576 Oryza alta HOM05M000063 ORTHO05M000063 1.9e-27 124.8 77 77.9
GWHGAZTO083719 Oryza alta HOM05M000063 ORTHO05M000063 2.1e-26 121.3 77 76.6
GWHGAZTO005651 Oryza alta HOM05M000063 ORTHO05M000063 3.3e-24 114.0 77 72.7
GWHGAZTO048047 Oryza alta HOM05M000063 ORTHO05M000063 2.8e-23 110.9 84 66.7
GWHGAZTO043472 Oryza alta HOM05M000063 ORTHO05M000063 4.8e-23 110.2 81 63.0
GWHGAZTO074552 Oryza alta HOM05M000063 ORTHO05M000063 2.4e-22 107.8 81 61.7
GWHGAZTO087214 Oryza alta HOM05M000063 ORTHO05M000063 2.0e-21 104.8 77 62.3
GWHGAZTO090500 Oryza alta HOM05M000735 ORTHO05M000583 3.4e-21 104.0 81 59.3
GWHGAZTO013978 Oryza alta HOM05M000063 ORTHO05M000063 5.9e-21 103.2 84 58.3
GWHGAZTO097910 Oryza alta HOM05M000063 ORTHO05M000063 1.0e-20 102.4 78 65.4
GWHGAZTO064485 Oryza alta HOM05M000063 ORTHO05M000063 1.3e-20 102.1 81 58.0
GWHGAZTO010376 Oryza alta HOM05M000063 ORTHO05M000063 6.5e-20 99.8 81 56.8
OB10G15050 Oryza brachyantha HOM05M000063 ORTHO05M000063 3.0e-17 90.9 77 54.5
GWHGAZTO078554 Oryza alta HOM05M000063 ORTHO05M000063 6.7e-17 89.7 66 65.2
OB11G18260 Oryza brachyantha HOM05M000063 ORTHO05M000063 8.8e-17 89.4 89 52.8
GWHGAZTO059322 Oryza alta HOM05M000063 ORTHO05M000063 4.4e-16 87.0 69 59.4
OB08G17710 Oryza brachyantha HOM05M002012 ORTHO05M004299 4.5e-13 77.0 64 59.4
OB05G17050 Oryza brachyantha HOM05M000063 ORTHO05M000063 2.5e-11 71.2 55 67.3
GWHGAZTO014875 Oryza alta HOM05M000063 ORTHO05M013332 2.6e-08 61.2 81 39.5
GWHGAZTO069007 Oryza alta HOM05M000063 ORTHO05M000063 3.3e-08 60.8 56 51.8
GWHGAZTO078231 Oryza alta HOM05M000063 ORTHO05M000063 7.4e-08 59.7 81 39.5
GWHGAZTO050058 Oryza alta HOM05M000063 ORTHO05M000063 1.7e-07 58.5 59 45.8
GWHGAZTO078134 Oryza alta HOM05M000063 ORTHO05M000063 3.7e-07 57.4 56 48.2
GWHGAZTO094773 Oryza alta HOM05M000063 ORTHO05M013332 1.4e-06 55.5 65 46.2
GWHGAZTO002838 Oryza alta HOM05M000063 ORTHO05M013332 1.8e-06 55.1 87 46.0
GWHGAZTO078430 Oryza alta HOM05M000063 ORTHO05M013332 1.8e-06 55.1 65 46.2
GWHGAZTO047962 Oryza alta HOM05M000063 ORTHO05M000063 9.1e-06 52.8 25 92.0


User provided reference genes

Program Settings