Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin08G050300 Miscanthus sinensis HOM05M007977 ORTHO05M006866 8.9e-51 202.6 107 100.0
Misin07G050100 Miscanthus sinensis HOM05M007977 ORTHO05M006866 4.6e-47 190.3 107 96.3
Sobic.004G051401 Sorghum bicolor HOM05M007977 ORTHO05M006866 3.8e-41 170.6 109 89.9
Sevir.1G076250 Setaria viridis HOM05M007977 ORTHO05M006866 1.3e-33 145.6 108 78.7
GWHGAORA015453 Cenchrus purpureus HOM05M007977 ORTHO05M006866 2.4e-32 141.4 108 77.8
Zm00001eb207520 Zea mays B73 HOM05M007977 ORTHO05M006866 5.5e-32 140.2 104 77.9
Pahal.1G047000 Panicum hallii HOM05M007977 ORTHO05M006866 1.2e-31 139.0 108 76.9
Zm00007a00007158 Zea mays B104 HOM05M007977 ORTHO05M006866 2.3e-30 134.8 104 76.0
EJB05_54419 Eragrostis curvula HOM05M007977 ORTHO05M006866 1.9e-29 131.7 105 73.3
Zjn_sc00045.1.g03580.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M007977 ORTHO05M006866 4.2e-24 114.0 110 65.5
EJB05_24423 Eragrostis curvula HOM05M007977 ORTHO05M006866 2.7e-23 111.3 92 72.8
Dexi1A01G0005040 Digitaria exilis HOM05M007977 ORTHO05M006866 6.7e-22 106.7 95 71.6
PH02Gene34676 Phyllostachys edulis HOM05M007977 ORTHO05M006866 2.1e-20 101.7 112 59.8
Horvu_MOREX_6H01G179600 Hordeum vulgare HOM05M007977 ORTHO05M006866 2.4e-19 98.2 108 62.0
V3.Lp_chr6_0G4542 Lolium perenne HOM05M007977 ORTHO05M006866 3.1e-19 97.8 113 62.8
TraesCS6B03G0421700 Triticum aestivum HOM05M007977 ORTHO05M006866 5.3e-19 97.1 110 59.1
TRIDC6BG024610 Triticum dicoccoides HOM05M007977 ORTHO05M006866 5.3e-19 97.1 110 59.1
GWHGASIY031299 Secale cereale HOM05M007977 ORTHO05M006866 6.9e-19 96.7 108 61.1
AET6Gv20355700 Aegilops tauschii HOM05M007977 ORTHO05M006866 9.0e-19 96.3 108 61.1
TraesCS6D03G0282000 Triticum aestivum HOM05M007977 ORTHO05M006866 9.0e-19 96.3 108 61.1
TRIDC6AG018670 Triticum dicoccoides HOM05M007977 ORTHO05M006866 1.5e-18 95.5 108 60.2
TraesCS6A03G0328200 Triticum aestivum HOM05M007977 ORTHO05M006866 3.4e-18 94.4 108 60.2
TRITD6Av1G046450 Triticum turgidum HOM05M007977 ORTHO05M006866 3.4e-18 94.4 108 60.2
AET7Gv21121400 Aegilops tauschii HOM05M007977 ORTHO05M006866 1.3e-17 92.4 105 56.2
TraesCS7D03G1060600 Triticum aestivum HOM05M007977 ORTHO05M006866 1.3e-17 92.4 105 56.2
GWHGAZTO016680 Oryza alta HOM05M007977 ORTHO05M006866 1.7e-17 92.0 112 56.2
EJB05_41963 Eragrostis curvula HOM05M007977 ORTHO05M006866 2.2e-17 91.7 112 55.4
Bradi3g04871 Brachypodium distachyon HOM05M007977 ORTHO05M006866 2.9e-17 91.3 97 61.9
PH02Gene03166 Phyllostachys edulis HOM05M007977 ORTHO05M006866 2.9e-17 91.3 114 51.8
GWHGAZTO068417 Oryza alta HOM05M007977 ORTHO05M006866 8.5e-17 89.7 113 54.9
TraesCS7B03G0965300 Triticum aestivum HOM05M007977 ORTHO05M006866 8.5e-17 89.7 103 55.3
TraesCS7A03G1111600 Triticum aestivum HOM05M007977 ORTHO05M006866 4.6e-15 84.0 104 53.8
TRITD7Av1G244040 Triticum turgidum HOM05M007977 ORTHO05M006866 4.6e-15 84.0 104 53.8
Ot_Chr2_g15575 Oropetium thomaeum HOM05M007977 ORTHO05M006866 7.9e-15 83.2 116 55.2
GWHGAZTO088880 Oryza alta HOM05M007977 ORTHO05M006866 1.8e-14 82.0 89 52.8
Horvu_MOREX_7H01G624700 Hordeum vulgare HOM05M007977 ORTHO05M006866 3.9e-14 80.9 105 54.3
OsKitaake02g051300 Oryza sativa Kitaake HOM05M007977 ORTHO05M006866 5.1e-14 80.5 97 55.7
Os02g0164400 Oryza sativa ssp. japonica HOM05M007977 ORTHO05M006866 5.1e-14 80.5 97 55.7
Sevir.4G274100 Setaria viridis HOM05M007977 ORTHO05M006866 5.1e-14 80.5 115 53.0
Zm00007a00049539 Zea mays B104 HOM05M007977 ORTHO05M006866 5.1e-14 80.5 107 52.3
Pahal.4G044100 Panicum hallii HOM05M007977 ORTHO05M006866 8.7e-14 79.7 115 50.4
GWHGAORA029098 Cenchrus purpureus HOM05M007977 ORTHO05M006866 1.1e-13 79.3 82 56.1
Sobic.010G230400 Sorghum bicolor HOM05M007977 ORTHO05M006866 2.5e-13 78.2 113 52.2
Zm00001eb273730 Zea mays B73 HOM05M007977 ORTHO05M006866 4.3e-13 77.4 107 51.4
Bradi1g32741 Brachypodium distachyon HOM05M007977 ORTHO05M006866 2.2e-12 75.1 111 50.5
PH02Gene09878 Phyllostachys edulis HOM05M002918 ORTHO05M003210 8.2e-12 73.2 93 52.7
p5.00_sc00107_p0003 Elaeis guineensis HOM05M009494 ORTHO05M006866 3.1e-11 71.2 103 46.6
GWHGAZTO073728 Oryza alta HOM05M007977 ORTHO05M006866 1.5e-10 68.9 95 48.4
CALSI_Maker00022059 Calamus simplicifolius HOM05M009494 ORTHO05M006866 5.9e-10 67.0 103 45.6
CALSI_Maker00005187 Calamus simplicifolius HOM05M009494 ORTHO05M006866 2.9e-09 64.7 103 43.7
Ma11_g13330 Musa acuminata HOM05M009494 ORTHO05M006866 1.6e-07 58.9 106 46.2
p5.00_sc00038_p0064 Elaeis guineensis HOM05M009494 ORTHO05M006866 2.1e-07 58.5 107 39.3
DDU693G0124 Dioscorea dumetorum HOM05M009494 ORTHO05M006866 1.4e-06 55.8 80 52.5
DDU106G0014 Dioscorea dumetorum HOM05M009494 ORTHO05M006866 2.3e-06 55.1 93 45.2
DDU113G0005 Dioscorea dumetorum HOM05M009494 ORTHO05M006866 2.3e-06 55.1 93 45.2
DDU116G0002 Dioscorea dumetorum HOM05M009494 ORTHO05M006866 2.3e-06 55.1 93 45.2
DDU509G0102 Dioscorea dumetorum HOM05M009494 ORTHO05M006866 2.3e-06 55.1 93 45.2
V3.Lp_chr2_0G6952 Lolium perenne HOM05M007977 ORTHO05M006866 6.7e-06 53.5 38 73.7
evm.TU.AsparagusV1_03.1197.V1.1 Asparagus officinalis HOM05M009494 ORTHO05M006866 8.8e-06 53.1 107 40.2
Ma08_g07060 Musa acuminata HOM05M009494 ORTHO05M006866 8.8e-06 53.1 107 43.0


User provided reference genes

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