Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
EJB05_49810 Eragrostis curvula HOM05M009745 ORTHO05M012192 1.2e-117 425.6 195 100.0
V3.Lp_chr4_0G22036 Lolium perenne HOM05M009745 ORTHO05M012192 6.7e-20 100.9 140 42.1
Seita.5G054500 Setaria italica HOM05M009745 ORTHO05M012192 1.6e-13 79.7 93 46.2
OsKitaake03g010800 Oryza sativa Kitaake HOM05M009745 ORTHO05M012192 3.6e-13 78.6 145 33.8
OsR498G0305107700.01 Oryza sativa ssp. indica HOM05M009745 ORTHO05M012192 4.6e-13 78.2 145 33.8
EJB05_32190 Eragrostis curvula HOM05M009745 ORTHO05M012192 7.9e-13 77.4 103 41.7
GWHGAZTO040386 Oryza alta HOM05M000521 ORTHO05M012192 7.9e-13 77.4 144 34.0
GWHGAORA040635 Cenchrus purpureus HOM05M009745 ORTHO05M012192 6.7e-12 74.3 141 33.3
PH02Gene15135 Phyllostachys edulis HOM05M009745 ORTHO05M012192 2.5e-11 72.4 51 66.7
EJB05_16208 Eragrostis curvula HOM05M009745 ORTHO05M012192 7.4e-11 70.9 157 29.3
V3.Lp_chr6_0G7020 Lolium perenne HOM05M008890 ORTHO05M011314 4.1e-09 65.1 138 34.1
V3.Lp_chr5_0G10432 Lolium perenne HOM05M008697 ORTHO05M009371 6.9e-09 64.3 95 40.0
Seita.2G094400 Setaria italica HOM05M008890 ORTHO05M011314 1.2e-08 63.5 92 40.2
Sevir.2G097200 Setaria viridis HOM05M008890 ORTHO05M011314 1.2e-08 63.5 92 40.2
EJB05_01073 Eragrostis curvula HOM05M008890 ORTHO05M011314 1.5e-08 63.2 116 35.3
EJB05_01088 Eragrostis curvula HOM05M008890 ORTHO05M011314 1.5e-08 63.2 116 35.3
Sobic.005G206800 Sorghum bicolor HOM05M008890 ORTHO05M011314 2.6e-08 62.4 92 38.0
GWHGAORA058258 Cenchrus purpureus HOM05M008697 ORTHO05M009371 3.4e-08 62.0 95 37.9
GWHGAORA015233 Cenchrus purpureus HOM05M008697 ORTHO05M009371 4.5e-08 61.6 95 37.9
Sevir.8G233300 Setaria viridis HOM05M008890 ORTHO05M011314 4.5e-08 61.6 92 37.0
Sobic.004G346700 Sorghum bicolor HOM05M009745 ORTHO05M012192 4.5e-08 61.6 93 38.7
Misin09G191800 Miscanthus sinensis HOM05M008890 ORTHO05M011314 5.9e-08 61.2 92 38.0
EJB05_26068 Eragrostis curvula HOM05M008890 ORTHO05M011314 1.3e-07 60.1 116 33.6
GWHGAORA058260 Cenchrus purpureus HOM05M008697 ORTHO05M009371 1.7e-07 59.7 95 36.8
V3.Lp_chr6_0G7016 Lolium perenne HOM05M008890 ORTHO05M011314 2.2e-07 59.3 134 32.1
Pahal.5G424700 Panicum hallii HOM05M009745 ORTHO05M012192 2.2e-07 59.3 58 50.0
V3.Lp_chr1_0G1390 Lolium perenne HOM05M008697 ORTHO05M009371 5.0e-07 58.2 120 30.8
OsKitaake05g206200 Oryza sativa Kitaake HOM05M008890 ORTHO05M011314 6.5e-07 57.8 141 31.9
OsKitaake05g247100 Oryza sativa Kitaake HOM05M019311 ORTHO05M009371 6.5e-07 57.8 100 37.0
Os05g0477500 Oryza sativa ssp. japonica HOM05M008890 ORTHO05M011314 6.5e-07 57.8 141 31.9
Os05g0544900 Oryza sativa ssp. japonica HOM05M019311 ORTHO05M009371 6.5e-07 57.8 100 37.0
GWHGASIY004630 Secale cereale HOM05M008697 ORTHO05M009371 8.5e-07 57.4 179 30.2
OB06G34200 Oryza brachyantha HOM05M009191 ORTHO05M012240 1.9e-06 56.2 109 36.7
OB06G34150 Oryza brachyantha HOM05M009191 ORTHO05M012240 7.2e-06 54.3 108 38.0
Seita.8G222700 Setaria italica HOM05M008890 ORTHO05M011314 7.2e-06 54.3 76 38.2

Aegilops tauschii (0 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (4 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (6 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (5 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (1 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza alta (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (3 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (3 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (0 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings