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Dicots PLAZA 5.0
Data
Overview
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Gene families
Expansion plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Pan-Genome
Pan and core families
Synteny scores overview
Synteny score chart
HOT-Region
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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/Interpro description
Gene family
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Thecc.06G132300
Gene toolbox
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Sequences
BLAST Hits
Orthologs
Colinear Genes Pairs
Genome Browser
Homology related tools
Local Gene Organization
Multiple Sequence Alignment
Phylogenetic Tree
Similarity Heatmap
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Custom Phylogenetic Tree
Integrative Orthology Viewer
Information
Query species
Theobroma cacao
Target species
Solanum pennellii
Number of paralogs
12
Number of orthologs
9
Download ortholog pairs
Integrative Orthology Viewer
Options
Orthology Types
Tree-based ortholog
Orthologous gene family
Colinearity
Best-Hits-and-Inparalogs(BHI)family
#Orthology Types
1
2
3
4
Supporting Types
CDS length
#Exons
GC content
Legend