Gene: Solyc09g065700.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g065700.3
  • Transcript Identifier Solyc09g065700.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 60040900-60061235 : positive

Gene Family Information

  • ID HOM05D000921
  • #Genes/#Species 653/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g065700.3.1
  • uniprot A0A3Q7I4D1
  • gene_id Solyc09g065700

Descriptions

  • Description BEACH domain (AHRD V3.3 *** A0A200Q4J4_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007033
IBA
GOA Databasevacuole organization
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT1G03060
GO:1902892
ISO
PLAZA Integrative Orthologypositive regulation of root hair elongation AT1G03060
GO:1903335
ISO
PLAZA Integrative Orthologyregulation of vacuolar transport AT1G03060
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT1G03060
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT1G03060
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT1G03060
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G03060
GO:0033962
ISO
PLAZA Integrative OrthologyP-body assembly AT1G03060
GO:1904580
ISO
PLAZA Integrative Orthologyregulation of intracellular mRNA localization AT1G03060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G03060
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G02660
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G03060
GO:0035619
ISO
PLAZA Integrative Orthologyroot hair tip AT1G03060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000409 BEACH domain
IPR036322 WD40-repeat-containing domain superfamily
IPR011993 PH-like domain superfamily
IPR036372 BEACH domain superfamily
IPR016024 Armadillo-type fold
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR023362 PH-BEACH domain
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
35.1 not assigned.annotated