Gene: Solyc06g065980.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g065980.3
  • Transcript Identifier Solyc06g065980.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 38995444-38998318 : positive

Gene Family Information

  • ID HOM05D001146
  • #Genes/#Species 541/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g065980.3.1
  • uniprot A0A3Q7GX02
  • gene_id Solyc06g065980

Descriptions

  • Description DNA/RNA-binding protein Alba-like (AHRD V3.3 *** A0A200QVB2_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT3G04620
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT2G34160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G34160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G34160
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G29250

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014560 Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR002775 DNA/RNA-binding protein Alba-like
IPR036882 Alba-like domain superfamily
Mapman id Description
15.3.6.2.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.R-loop reader protein (ALBA1/2)