Gene: SGA_v2.0_scaffold477G52215

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold477G52215
  • Transcript Identifier SGA_v2.0_scaffold477T52215
  • Gene Type Coding gene
  • Location scaffold477 : 110067-111477 : positive

Gene Family Information

  • ID HOM05D001133
  • #Genes/#Species 544/79
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Ribulose bisphosphate carboxylase large chain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015977
IEA
InterProcarbon fixation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion ATCG00490
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid ATCG00490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016984
IEA
InterProribulose-bisphosphate carboxylase activity
GO:0000287
IEA
InterPromagnesium ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00490
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma ATCG00490
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome ATCG00490
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope ATCG00490
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00490
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00490
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00490
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast ATCG00490
GO:0005618
ISO
PLAZA Integrative Orthologycell wall ATCG00490
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036422 RuBisCO large subunit, N-terminal domain superfamily
IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal
IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily
IPR033966 RuBisCO
IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
IPR020888 Ribulose bisphosphate carboxylase large subunit, type I
Mapman id Description
1.2.1.1.1 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo heterodimer.large subunit