Gene: SGA_v2.0_scaffold27G11600

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold27G11600
  • Transcript Identifier SGA_v2.0_scaffold27T11600
  • Gene Type Coding gene
  • Location scaffold27 : 1804083-1813392 : negative

Gene Family Information

  • ID HOM05D001312
  • #Genes/#Species 478/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product metalloendopeptidases
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G35210
GO:0010019
ISO
PLAZA Integrative Orthologychloroplast-nucleus signaling pathway AT5G35210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22760
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT5G35210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009707
ISO
PLAZA Integrative Orthologychloroplast outer membrane AT5G35210
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G35210
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G35210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018501 DDT domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR028942 WHIM1 domain
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
Mapman id Description
12.4.2.2.1 Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CDM complex.component DDP
15.5.29 RNA biosynthesis.transcriptional regulation.transcription factor (PHD)