Gene: SGA_v2.0_scaffold242G44232

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold242G44232
  • Transcript Identifier SGA_v2.0_scaffold242T44232
  • Gene Type Coding gene
  • Location scaffold242 : 101872-106130 : positive

Gene Family Information

  • ID HOM05D001154
  • #Genes/#Species 535/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product 1-deoxy-D-xylulose-5-phosphate synthase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT4G15560
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT4G15560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0008661
IEA
InterPro1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G15560
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G15560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G15560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
IPR005477 Deoxyxylulose-5-phosphate synthase
IPR033248 Transketolase, C-terminal domain
IPR005475 Transketolase-like, pyrimidine-binding domain
IPR029061 Thiamin diphosphate-binding fold
Mapman id Description
9.1.2.2 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-D-xylulose 5-phosphate synthase (DXS)