Gene: PGSC0003DMG400014711

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400014711
Transcript Identifier PGSC0003DMT400038147
Gene Type Coding gene
Location ST4.03ch06 : 1912762-1917908 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006183
#Genes/#Species 128/95
Phylogenetic origin

ID ORTHO05D007844
#Genes/#Species 126/95
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37451133
id PGSC0003DMG400014711.v4.03
uniprot M1B6E3

Descriptions

Short descriptions
Ortholog descriptions

Description Nucleotide binding protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1903775	IBA	GOA Database	regulation of DNA double-strand break processing
GO:2001173	IBA	GOA Database	regulation of histone H2B conserved C-terminal lysine ubiquitination

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0035861	IBA	GOA Database	site of double-strand break
GO:0005634	IBA	GOA Database	nucleus
GO:0080008	ISO	PLAZA Integrative Orthology	Cul4-RING E3 ubiquitin ligase complex	AT2G20330

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR020472	G-protein beta WD-40 repeat
IPR001680	WD40 repeat
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR036322	WD40-repeat-containing domain superfamily

Mapman id	Description
19.2.2.8.3.4.1	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.substrate adaptor (OZS3)