Gene: Carub.0008s2011

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2011
  • Transcript Identifier Carub.0008s2011.1
  • Gene Type Coding gene
  • Location scaffold_8 : 10206453-10207699 : positive

Gene Family Information

  • ID HOM05D003498
  • #Genes/#Species 195/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2011.v1.1
  • pacid 39252481
  • synonym Carubv10026797m.g

Descriptions

  • Description 2.7.4.9 - dTMP kinase / TMPK
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006233
IEA
InterProdTDP biosynthetic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G59440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004798
IEA
InterProthymidylate kinase activity
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G59440
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G59440
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G59440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR039430 Thymidylate kinase-like domain
IPR018094 Thymidylate kinase
Mapman id Description
6.3.2.3 Nucleotide metabolism.deoxynucleotides.salvage pathway.thymidylate kinase