Gene: Carub.0008s1372
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s1372
- Transcript Identifier Carub.0008s1372.1
- Gene Type Coding gene
- Location scaffold_8 : 7834253-7836964 : positive
Gene Family Information
- ID HOM05D000482
- #Genes/#Species 1101/97
- Specific Family
- ID ORTHO05D000349
- #Genes/#Species 1074/97
- Specific Family
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s1372.v1.1
- pacid 39250727
- synonym Carubv10027623m.g
Descriptions
- Description PTHR31645:SF8 - METAL-NICOTIANAMINE TRANSPORTER YSL3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003006 | ISO | PLAZA Integrative Orthology | developmental process involved in reproduction | AT5G53550 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G53550 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035673 | IEA | InterPro | oligopeptide transmembrane transporter activity | |
| GO:0051980 | ISO | PLAZA Integrative Orthology | iron-nicotianamine transmembrane transporter activity | AT5G53550 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G53550 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 24.2.10.1 | Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL) |
| 25.4.2.2.2 | Nutrient uptake.metal homeostasis.iron.chelation-based strategy uptake.ferric cation-chelator transporter (YSL) |