Gene: Ah.11g050200

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.11g050200
  • Transcript Identifier Ah.11g050200-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_11 : 20875487-20878294 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.11g050200-v1.1.a1

Descriptions

  • Description Pentatricopeptide repeat-containing protein At3g63370, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 86)
  • note Pentatricopeptide repeat-containing protein At3g63370, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 86)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G08490
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT5G08490
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT3G63370
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G08490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G63370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G63370
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G08490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.51 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (OTP86)