Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
arahy.Tifrunner.gnm1.ann1.644H52 K06171 - nicastrin (NCSTN) arahy.Tifrunner.gnm1.Arahy.03 - View
arahy.Tifrunner.gnm1.ann1.F4VH9C 2.7.7.73 - Sulfur carrier protein ThiS adenylyltransferase arahy.Tifrunner.gnm1.Arahy.07 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G17540 LG-9 - View
Actinidia chinensis Actinidia17195 Lachesis_group11 + View
Actinidia chinensis Actinidia06481 Lachesis_group16 - View
Arabidopsis lyrata AL7G46290 scaffold_7 + View
Avicennia marina MSTRG.15655 ScioBoG_19538_HRSCAF_19626 + View
Arabidopsis thaliana AT5G37530 NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: binding%2C catalytic activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594)%2C Molybdenum cofactor biosynthesis%2C MoeB (InterPro:IPR009036)%2C NAD(P)-binding domain (InterPro:IPR016040)%3B BEST Arabidopsis thaliana protein match is: co-factor for nitrate%2C reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: binding%2C catalytic activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594)%2C Molybdenum cofactor biosynthesis%2C MoeB (InterPro:IPR009036)%2C NAD(P)-binding domain (InterPro:IPR016040)%3B BEST Arabidopsis thaliana protein match is: co-factor for nitrate%2C reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.1)%3B Has 12378 Blast hits to 12300 proteins in 2371 species: Archae - 214%3B Bacteria - 8305%3B Metazoa - 788%3B Fungi - 632%3B Plants - 298%3B Viruses - 0%3B Other Eukaryotes - 2141 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC02g09580 ChrC02 + View
Brassica napus C04p44390 C04 + View
Brassica napus A04p10670 A04 + View
Brassica oleracea BolC4t26010H C4 + View
Brassica rapa BraA04t16734Z A04 + View
Camellia sinensis var. sinensis CSS0009784 PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Vitis vinifera] Chr1 + View
Cicer arietinum L. Ca_17085_v3 Ca_LG6_v3 + View
Corylus avellana Haze_14286 Similar to At3g52640/At3g52650: Nicastrin (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc07_g13180 Putative Uncharacterized protein YHR003C chr7 + View
Carpinus fangiana Cfa007785 Cfa03 + View
Cardamine hirsuta CARHR215380 Adenylyltransferase and sulfurtransferase MOCS3 Chr7 - View
Carya illinoinensis CiPaw.03G074200 K06171 - nicastrin (NCSTN) Chr03 - View
Carica papaya Cpa.g.sc116.76 supercontig_116 + View
Capsella rubella Carub.0007s3270 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED scaffold_7 + View
Daucus carota DCAR_014158 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv19050 GWHABJS00000014 - View
Durio zibethinus Duzib138G1710 NW_019167893.1 - View
Eucalyptus grandis Eucgr.F02879 Chr06 - View
Eutrema salsugineum Thhalv10027822m.g PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED scaffold_14 - View
Fragaria x ananassa FAN26G0021 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED Fvb1-2 - View
Fragaria x ananassa FAN19G2740 PTHR21092//PTHR21092:SF0 - NICASTRIN // NICASTRIN Fvb1-4 - View
Fragaria vesca FvH4_1g29991 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED Fvb1 - View
Glycine max Glyma.02G243700 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED Gm02 - View
Glycine max Glyma.18G041900 PTHR21092 - NICASTRIN Gm18 - View
Glycine max Glyma.14G212800 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED Gm14 - View
Glycine max Glyma.11G214700 K06171 - nicastrin (NCSTN) Gm11 + View
Gossypium raimondii Gorai.007G187700 Chr07 - View
Hydrangea macrophylla Hma1.2p1_0158F.1_g070010 Hma1.2p1_0158F.1 + View
Lupinus albus Lalb_Chr18g0053551 K06171 - nicastrin (NCSTN) Lalb_Chr18 - View
Lotus japonicus Lj6g0017134 K06171 - nicastrin (NCSTN) chr6 - View
Lotus japonicus LjContig00141g0018139 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED Contig00141 - View
Lonicera japonica Lj2C517G4 GWHAAZE00000002 + View
Lonicera japonica Lj4A258G27 GWHAAZE00000004 + View
Manihot esculenta Manes.02G078600 Chromosome02 - View
Medicago truncatula Medtr3g065110 M28 Zn-peptidase nicastrin chr3 + View
Olea europaea Oeu030291.2 chr10 + View
Punica granatum PGR004G1667 NC_045131.1 + View
Pisum sativum Psat5g119600 Nicastrin chr5LG3 - View
Populus trichocarpa Potri.004G082900 K06171 - nicastrin (NCSTN) Chr04 - View
Phaseolus vulgaris Phvul.008G237900 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED Chr08 - View
Phaseolus vulgaris Phvul.001G228700 K06171 - nicastrin (NCSTN) Chr01 + View
Rhododendron simsii Rhsim10G0180300 chr10 - View
Solanum lycopersicum Solyc11g011480.2 Nicastrin (AHRD V3.3 *** A0A2G2Y4U5_CAPAN) SL4.0ch11 - View
Schrenkiella parvula Sp7g04620 PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED ch7-1 - View
Solanum pennellii Sopen11g006270 Zn-dependent exopeptidases superfamily protein | INVOLVED IN: protein processing | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nicastrin Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400013310 Nicastrin ST4.03ch11 + View
Tarenaya hassleriana THA.LOC104805637 nicastrin isoform X1 NW_010961290.1 - View
Utricularia gibba unitig_32.g10720 unitig_32 - View
Vaccinium macrocarpon vmacro20587 Similar to At3g52640/At3g52650: Nicastrin (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0515 CM024073.1 + View
Vigna mungo VMungo1383G1931 CM024070.1 + View