Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen01g014660hypothetical proteinSpenn-ch01+View
Sopen08g012630Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. | calcium-dependent protein kinase 4 (CPK4) | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , EF-Hand 1, calcium-binding site , Serine/threonine-protein kinase domain , Calcium-binding EF-hand , EF-hand-like domain , EF-hand , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase, catalytic domain , EF-HAND 2 , Calcium-dependent protein kinase , Calcium/calmodulin-dependent protein kinase-like | BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 2Spenn-ch08-View
Sopen09g023800DNA helicase PIF1, ATP-dependent, PIF1 helicase | CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent | BEST Arabidopsis thaliana protein match is: PIF1 helicaseSpenn-ch09+View
Sopen09g006970hypothetical proteinSpenn-ch09+View
Sopen02g010400Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6Spenn-ch02+View
Sopen12g014760hypothetical proteinSpenn-ch12-View
Sopen03g017760hypothetical proteinSpenn-ch03-View
Sopen12g016560hypothetical proteinSpenn-ch12-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Cannabis sativaCANSAT78G1142NC_044376.1-View
Cannabis sativaCANSAT35G1235NC_044378.1-View
Erigeron canadensisECA236G5075Conyza_canadensis_scaffold:3-View
Erigeron canadensisECA233G4118Conyza_canadensis_scaffold:1+View
Erigeron canadensisECA240G2992Conyza_canadensis_scaffold:5-View
Erigeron canadensisECA246G4273Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA233G1381Conyza_canadensis_scaffold:1+View
Erigeron canadensisECA233G3334Conyza_canadensis_scaffold:1-View
Erigeron canadensisECA240G0844Conyza_canadensis_scaffold:5+View
Erigeron canadensisECA234G4814Conyza_canadensis_scaffold:4-View
Erigeron canadensisECA238G0181Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA234G1035Conyza_canadensis_scaffold:4-View
Erigeron canadensisECA232G3959Conyza_canadensis_scaffold:2+View
Erigeron canadensisECA234G1666Conyza_canadensis_scaffold:4-View
Papaver somniferumPSO210G2836NC_039359.1+View
Papaver somniferumPSO729G0172NW_020622270.1+View
Papaver somniferumPSO675G3097NC_039358.1+View
Rhododendron simsiiRhsim01G0156500chr01-View
Tripterygium wilfordiiTWI59G0502NC_052248.1+View
Tripterygium wilfordiiTWI32G0300NC_052254.1+View