Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen10g007730hypothetical proteinSpenn-ch10+View
Sopen01g024500DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch01-View
Sopen03g016020Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch03+View
Sopen07g006490RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch07+View
Sopen06g010980hypothetical proteinSpenn-ch06-View
Sopen08g017240hypothetical proteinSpenn-ch08-View
Sopen11g011920hypothetical proteinSpenn-ch11+View
Sopen00g012040Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily proteinSpenn-ch00-View
Sopen01g023890RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch01+View
Sopen04g018170DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch04-View
Sopen04g017010hypothetical proteinSpenn-ch04-View
Sopen05g020300hypothetical proteinSpenn-ch05-View
Sopen07g013250hypothetical proteinSpenn-ch07-View
Sopen07g017460DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07+View
Sopen00g003390DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch00+View
Sopen06g007150RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch06-View
Sopen07g012090DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07+View
Sopen10g017440hypothetical proteinSpenn-ch10+View
Sopen11g018640hypothetical proteinSpenn-ch11-View
Sopen01g016010hypothetical proteinSpenn-ch01+View
Sopen07g016580hypothetical proteinSpenn-ch07+View
Sopen09g012310Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily proteinSpenn-ch09-View
Sopen10g008120DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch10-View
Sopen06g010230RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch06-View
Sopen07g020290hypothetical proteinSpenn-ch07+View
Sopen02g003120hypothetical proteinSpenn-ch02+View
Sopen06g013190hypothetical proteinSpenn-ch06+View
Sopen01g026920Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily proteinSpenn-ch01+View
Sopen05g016440DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch05-View
Sopen02g008520RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch02+View
Sopen03g011820hypothetical proteinSpenn-ch03-View
Sopen02g003940hypothetical proteinSpenn-ch02+View
Sopen10g010950hypothetical proteinSpenn-ch10+View
Sopen01g015620DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch01-View
Sopen07g014830hypothetical proteinSpenn-ch07+View
Sopen10g025370hypothetical proteinSpenn-ch10-View
Sopen07g022300hypothetical proteinSpenn-ch07+View
Sopen10g009530hypothetical proteinSpenn-ch10-View
Sopen11g020740hypothetical proteinSpenn-ch11-View
Sopen07g014510DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07-View
Sopen12g011700RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch12+View
Sopen10g010450DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch10-View
Sopen04g010340RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch04+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgarisEL10Ac7g17463PF14111 - Domain of unknown function (DUF4283) (DUF4283)Chr7_EL10_PGA_scaffold5+View
Cannabis sativaCANSAT64G1660NC_044379.1+View
Cannabis sativaCANSAT25G0727NC_044370.1+View
Cannabis sativaCANSAT35G1027NC_044378.1-View
Carya illinoinensisCiPaw.10G104100PF13456 - Reverse transcriptase-like (RVT_3)Chr10-View
Erigeron canadensisECA234G2392Conyza_canadensis_scaffold:4-View
Erigeron canadensisECA236G0899Conyza_canadensis_scaffold:3-View
Erigeron canadensisECA240G1343Conyza_canadensis_scaffold:5-View
Erigeron canadensisECA233G4110Conyza_canadensis_scaffold:1-View
Erigeron canadensisECA246G3449Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA238G3409Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA248G2238Conyza_canadensis_scaffold:9+View
Erigeron canadensisECA234G3911Conyza_canadensis_scaffold:4-View
Erigeron canadensisECA248G2549Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA238G2472Conyza_canadensis_scaffold:6+View
Erigeron canadensisECA238G0342Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA247G1369Conyza_canadensis_scaffold:7-View
Erigeron canadensisECA240G3188Conyza_canadensis_scaffold:5+View
Erigeron canadensisECA247G0930Conyza_canadensis_scaffold:7-View
Erigeron canadensisECA238G4228Conyza_canadensis_scaffold:6+View
Erigeron canadensisECA246G5243Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA240G0545Conyza_canadensis_scaffold:5+View
Erigeron canadensisECA238G1242Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA238G1697Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA248G0835Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA240G3555Conyza_canadensis_scaffold:5-View
Erigeron canadensisECA248G0579Conyza_canadensis_scaffold:9+View
Erigeron canadensisECA246G0074Conyza_canadensis_scaffold:8+View
Erigeron canadensisECA232G4122Conyza_canadensis_scaffold:2+View
Fragaria vescaFvH4_7g03341PTHR19446//PTHR19446:SF384 - REVERSE TRANSCRIPTASES // SUBFAMILY NOT NAMEDFvb7-View
Fragaria vescaFvH4_5g32541Fvb5-View
Olea europaeaOeu021739.1chr12-View
Papaver somniferumPSO170G1940NC_039360.1+View
Papaver somniferumPSO832G2731NC_039367.1-View
Papaver somniferumPSO478G4853NC_039361.1+View
Papaver somniferumPSO170G4446NC_039360.1-View
Papaver somniferumPSO675G9216NC_039358.1-View
Papaver somniferumPSO478G0819NC_039361.1+View
Papaver somniferumPSO675G1347NC_039358.1-View
Quercus lobataQL10p05427010+View
Rhododendron simsiiRhsim02G0177700chr02+View
Sequoiadendron giganteumSEGI_33462chr10+View
Sequoiadendron giganteumSEGI_18886chr11+View
Tripterygium wilfordiiTWI59G0875NC_052248.1+View