Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen00g007410Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily proteinSpenn-ch00-View
Sopen07g017190Pentatricopeptide repeat (PPR-like) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily proteinSpenn-ch07-View
Sopen11g021170Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily proteinSpenn-ch11-View
Sopen03g016890Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes. | mitochondrial RNAediting factor 1 (MEF1) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily proteinSpenn-ch03+View
Sopen06g011360SLOW GROWTH 1 (SLO1) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily proteinSpenn-ch06+View
Sopen06g008540Tetratricopeptide repeat (TPR)-like superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: leaf whorl, flower, seed | EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily proteinSpenn-ch06+View
Sopen09g022760Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22Spenn-ch09-View
Sopen11g024230SLOW GROWTH 1 (SLO1) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily proteinSpenn-ch11+View
Sopen03g016080Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily proteinSpenn-ch03-View
Sopen10g024640Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22Spenn-ch10-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Avicennia marinaMSTRG.25446ScioBoG_4119_HRSCAF_4138-View
Brassica carinataBcaC01g03060ChrC01+View
Camellia sinensis var. sinensisCSS0048121PREDICTED: pentatricopeptide repeat-containing protein At1g71420 [Prunus mume]Chr9-View
Cicer arietinum L.Ca_06770_v3Ca_LG3_v3-View
Corylus avellanaHaze_17493Similar to PCMP-H12: Pentatricopeptide repeat-containing protein At1g08070, chloroplastic (Arabidopsis thaliana OX%3D3702)7+View
Durio zibethinusDuzib177G0018NW_019168004.1-View
Erigeron canadensisECA238G1013Conyza_canadensis_scaffold:6+View
Erigeron canadensisECA233G4784Conyza_canadensis_scaffold:1-View
Erigeron canadensisECA233G5333Conyza_canadensis_scaffold:1-View
Erigeron canadensisECA248G0022Conyza_canadensis_scaffold:9+View
Erigeron canadensisECA234G0834Conyza_canadensis_scaffold:4+View
Eucalyptus grandisEucgr.F03835Chr06+View
Erythranthe guttataMigut.C01088scaffold_3+View
Medicago truncatulaMedtr5g067140pentatricopeptide (PPR) repeat proteinchr5+View
Nelumbo nuciferaNn5g27757chr5-View
Nicotiana tabacumNitab4.5_0000560g0060Pentatricopeptide repeat, Tetratricopeptide-like helicalNitab4.5_0000560+View
Oryza sativa ssp. japonicaOs12g0181900Pentatricopeptide repeat domain containing protein.chr12+View
Petunia axillarisPeaxi162Scf00310g00083Pentatricopeptide repeat-containing proteinPeaxi162Scf00310+View
Petunia axillarisPeaxi162Scf00268g01015Mannan endo-1,4-beta-mannosidase 2Peaxi162Scf00268+View
Sapria himalayanaSHI24149scaffold44_4510576+View
Solanum lycopersicumSolyc11g017290.1Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8GEG1_CAPAN)SL4.0ch11-View
Theobroma cacaoThecc.09G162400Uncharacterized proteinChromosome_9+View