Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g034030 Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis. | FLOWERING LOCUS D (FLD) | FUNCTIONS IN: primary amine oxidase activity | INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Amine oxidase , SWIRM | BEST Arabidopsis thaliana protein match is: LSD1-like 1 Spenn-ch05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G2970 LG-3 + View
Avicennia marina MSTRG.9149 ScioBoG_11560_HRSCAF_11609 - View
Aquilegia oxysepala Aqoxy1G01138 CHR01 - View
Camellia sinensis var. sinensis CSS0003817 PREDICTED: protein FLOWERING LOCUS D isoform X1 [Vitis vinifera] Chr1 - View
Cucumis melo MELO3C019826.2 Lysine-specific histone demethylase 1-like protein chr03 - View
Daucus carota DCAR_006413 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv36390 GWHABJS00000009 + View
Davidia involucrata Dinv31235 GWHABJS00000004 - View
Durio zibethinus Duzib114G0428 NW_019167926.1 + View
Erigeron canadensis ECA233G3538 Conyza_canadensis_scaffold:1 + View
Gossypium hirsutum Gohir.A05G293100 K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) A05 + View
Gossypium hirsutum Gohir.D05G293801 PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 D05 + View
Gossypium raimondii Gorai.009G310400 Chr09 + View
Manihot esculenta Manes.10G050300 Chromosome10 + View
Nelumbo nucifera Nn6g35273 chr6 - View
Nicotiana tabacum Nitab4.5_0001450g0110 Homeodomain-like, SWIRM domain, Amine oxidase, NAD(P)-binding domain, Winged helix-turn-helix DNA-binding domain Nitab4.5_0001450 + View
Nicotiana tabacum Nitab4.5_0000096g0320 SWIRM domain, Homeodomain-like, Amine oxidase, Winged helix-turn-helix DNA-binding domain Nitab4.5_0000096 - View
Papaver somniferum PSO063G5841 NC_039364.1 + View
Striga asiatica SGA_v2.0_scaffold62G21385 scaffold62 - View
Sechium edule Sed0015646 LG03 - View
Solanum tuberosum PGSC0003DMG400023479 Amine oxidase ST4.03ch05 + View
Trochodendron aralioides TAR623G0154 group7 + View
Theobroma cacao Thecc.10G083900 Flavin containing amine oxidoreductase family protein Chromosome_10 + View
Vaccinium macrocarpon vmacro04841 Similar to FLD: Protein FLOWERING LOCUS D (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01016218001 chr13 + View