Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc10g0000670GWHAASQ00000010+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG11G13960LG-11-View
Acer truncatumAtru.chr8.529chr8+View
Actinidia chinensisActinidia18071Lachesis_group11+View
Actinidia chinensisActinidia17597Lachesis_group21+View
Actinidia chinensisActinidia26261Lachesis_group3+View
Arabidopsis lyrataAL6G26480scaffold_6+View
Avicennia marinaMSTRG.15439ScioBoG_19538_HRSCAF_19626+View
Avicennia marinaMSTRG.23865ScioBoG_3895_HRSCAF_3912-View
Avicennia marinaMSTRG.2981ScioBoG_102835_HRSCAF_103059+View
Amaranthus hybridusAh.10g038100Protein COBRA (Cell expansion protein)AmaHy_arrow1_Scaffold_10+View
Amaranthus hybridusAh.16g101110COBRA-like protein 1 (Protein BRITTLE CULM1-like 6)AmaHy_arrow1_Scaffold_16-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.LA1S8RPF04833 - COBRA-like protein (COBRA)arahy.Tifrunner.gnm1.Arahy.10+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.F44UYKPF04833 - COBRA-like protein (COBRA)arahy.Tifrunner.gnm1.Arahy.11+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.B798EQPF04833 - COBRA-like protein (COBRA)arahy.Tifrunner.gnm1.Arahy.04+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.FK15VWPF04833 - COBRA-like protein (COBRA)arahy.Tifrunner.gnm1.Arahy.20+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.XMS8ZMPF04833 - COBRA-like protein (COBRA)arahy.Tifrunner.gnm1.Arahy.01-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.HB635GPF04833 - COBRA-like protein (COBRA)arahy.Tifrunner.gnm1.Arahy.14+View
Arabidopsis thalianaAT3G29810COBRA-like protein 2 precursor COBRA-like protein 2 precursor (COBL2)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: anchored to plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1)%3B Has 381 Blast hits to 370 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 381%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr3+View
Arabidopsis thalianaAT5G15630COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a member of the COBRA family%2C similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. IRREGULAR XYLEM 6 (IRX6)%3B INVOLVED IN: secondary cell wall biogenesis%3B LOCATED IN: plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1)%3B Has 379 Blast hits to 368 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 379%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr5+View
Brassica carinataBcaB01g05036ChrB01-View
Brassica carinataBcaC06g30855ChrC06-View
Brassica napusC02p55920C02+View
Brassica napusC07p46460C07-View
Brassica napusC09p61480C09-View
Brassica napusA10p23340A10-View
Brassica napusA02p36870A02+View
Brassica oleraceaBolC2t06711HC2+View
Brassica rapaBraA02t08679ZA02+View
Brassica rapaBraA10t44402ZA10-View
Brassica rapaBraA03t10048ZA03+View
Beta vulgarisEL10Ac5g11166PF04833 - COBRA-like protein (COBRA)Chr5_EL10_PGA_scaffold2+View
Beta vulgarisEL10Ac2g04452PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4Chr2_EL10_PGA_scaffold6+View
Camellia sinensis var. sinensisCSS0039433COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family [Theobroma cacao]Chr1+View
Camellia sinensis var. sinensisCSS0034060PREDICTED: protein COBRA-like [Sesamum indicum]Chr2+View
Capsicum annuumCAN.G497.83PGAv.1.6.scaffold497+View
Capsicum annuumCAN.G93.53PGAv.1.6.scaffold93-View
Cannabis sativaCANSAT64G0169NC_044379.1+View
Corylus avellanaHaze_14395Similar to BC1LP1: COBRA-like protein 7 (Oryza sativa subsp. japonica OX%3D39947)5+View
Citrus clementinaCiclev10021527m.gscaffold_3+View
Ceratophyllum demersumCDE04G09672+View
Carpinus fangianaCfa007681Cfa03+View
Cardamine hirsutaCARHR197690COBRA-like proteinChr6-View
Carya illinoinensisCiPaw.03G084500PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4Chr03+View
Citrullus lanatusClCG07G015950COBRA-like proteinCG_Chr07+View
Cucumis meloMELO3C026307.2protein COBRA-likechr07+View
Carica papayaCpa.g.sc14.204supercontig_14+View
Chenopodium quinoaAUR62023171COBL4: COBRA-like protein 4C_Quinoa_Scaffold_1189+View
Chenopodium quinoaAUR62009493Protein of unknown functionC_Quinoa_Scaffold_3674+View
Chenopodium quinoaAUR62032116COB: Protein COBRAC_Quinoa_Scaffold_1177+View
Capsella rubellaCarub.0006s1378PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4scaffold_6+View
Capsella rubellaCarub.0005s0835PF04833 - COBRA-like protein (COBRA)scaffold_5+View
Cucumis sativus L.CsaV3_4G010170COBRA-like proteinchr4+View
Daucus carotaDCAR_010169hypothetical proteinDCARv2_Chr3-View
Daucus carotaDCAR_025446hypothetical proteinDCARv2_Chr7+View
Davidia involucrataDinv34917GWHABJS00000012+View
Davidia involucrataDinv33853GWHABJS00000014+View
Durio zibethinusDuzib068G0024NW_019167838.1+View
Durio zibethinusDuzib138G1682NW_019167893.1+View
Durio zibethinusDuzib211G0487NW_019168049.1+View
Durio zibethinusDuzib205G0824NW_019168381.1+View
Erigeron canadensisECA232G2665Conyza_canadensis_scaffold:2+View
Erigeron canadensisECA238G1822Conyza_canadensis_scaffold:6-View
Eucalyptus grandisEucgr.K02540Chr11+View
Eucalyptus grandisEucgr.B00628Chr02+View
Eucalyptus grandisEucgr.J01392Chr10+View
Erythranthe guttataMigut.H00599scaffold_8+View
Eutrema salsugineumThhalv10013604m.gPTHR31673:SF2 - COBRA-LIKE PROTEIN 4scaffold_2+View
Eutrema salsugineumThhalv10004232m.gPF04833 - COBRA-like protein (COBRA)scaffold_6-View
Fragaria x ananassaFAN05G3812PF04833 - COBRA-like protein (COBRA)Fvb6-3+View
Fragaria x ananassaFAN14G0201PF04833 - COBRA-like protein (COBRA)Fvb6-1+View
Fragaria x ananassaFAN18G0024PTHR31673:SF2 - COBRA-LIKE PROTEIN 4Fvb5-1+View
Fragaria vescaFvH4_6g46460PF04833 - COBRA-like protein (COBRA)Fvb6+View
Gossypium hirsutumGohir.A07G180900PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATEDA07-View
Gossypium hirsutumGohir.D03G097400PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4D03-View
Gossypium hirsutumGohir.A11G159360PF04833 - COBRA-like protein (COBRA)A11+View
Gossypium hirsutumGohir.D07G187400PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATEDD07-View
Gossypium hirsutumGohir.A03G071000PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4A03-View
Glycine maxGlyma.19G033500PF04833 - COBRA-like protein (COBRA)Gm19+View
Glycine maxGlyma.08G249700PF04833 - COBRA-like protein (COBRA)Gm08+View
Glycine maxGlyma.13G053200PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4Gm13+View
Glycine maxGlyma.18G271900PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATEDGm18+View
Gossypium raimondiiGorai.001G208300Chr01-View
Gossypium raimondiiGorai.003G102500Chr03-View
Lupinus albusLalb_Chr10g0092781PTHR31673//PTHR31673:SF3 - FAMILY NOT NAMED // COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATEDLalb_Chr10-View
Lupinus albusLalb_Chr02g0158691PF04833 - COBRA-like protein (COBRA)Lalb_Chr02+View
Lotus japonicusLj1g0011062PTHR31673:SF2 - COBRA-LIKE PROTEIN 4chr1+View
Lotus japonicusLj2g0024823PF04833 - COBRA-like protein (COBRA)chr2-View
Lonicera japonicaLj4A121G74GWHAAZE00000004+View
Lactuca sativaLsat_1_v5_gn_4_173220PF04833 - COBRA-like protein (COBRA)Lsat_1_v8_lg_4+View
Lactuca sativaLsat_1_v5_gn_2_89561Lsat_1_v8_lg_2-View
Magnolia biondiiMBI19_g06125_MAGBIOAED:0.25Chr19-View
Magnolia biondiiMBI16_g03091_MAGBIOAED:0.07Chr16+View
Malus domesticaMD09G1072800COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein familyChr09+View
Malus domesticaMD17G1064200COBRA-like protein 1 precursorChr17+View
Malus domesticaMD06G1203700COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein familyChr06+View
Manihot esculentaManes.02G058100Chromosome02+View
Medicago truncatulaMedtr6g015865COBRA-like protein 2 precursorchr6-View
Medicago truncatulaMedtr7g015950COBRA-like protein 2 precursorchr7+View
Nelumbo nuciferaNn4g23485chr4+View
Nelumbo nuciferaNn3g17496chr3+View
Olea europaeaOeu004421.1chr7-View
Petunia axillarisPeaxi162Scf00166g00335COBRA-like protein 4Peaxi162Scf00166+View
Prunus persicaPrupe.3G250300PTHR31673:SF2 - COBRA-LIKE PROTEIN 4Pp03+View
Prunus persicaPrupe.5G207800PF04833 - COBRA-like protein (COBRA)Pp05+View
Papaver somniferumPSO478G3838NC_039361.1+View
Papaver somniferumPSO017G2673NC_039362.1+View
Populus trichocarpaPotri.004G117100PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATEDChr04+View
Populus trichocarpaPotri.017G098600PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATEDChr17+View
Phaseolus vulgarisPhvul.008G029000PTHR31673:SF2 - COBRA-LIKE PROTEIN 4Chr08+View
Phaseolus vulgarisPhvul.004G041300PF04833 - COBRA-like protein (COBRA)Chr04+View
Quercus lobataQL02p066275CM012294+View
Rosa chinensisRcHm_v2.0_Chr2g0165011RcHm_v2.0_Chr2+View
Rhododendron simsiiRhsim08G0076100chr08+View
Rhododendron simsiiRhsim10G0055500chr10+View
Striga asiaticaSGA_v2.0_scaffold148G36430scaffold148+View
Striga asiaticaSGA_v2.0_scaffold52G19116scaffold52+View
Salix brachistaSabra04G0070500GWHAAZH00000004+View
Salix brachistaSabra17G0085000GWHAAZH00000017+View
Sechium eduleSed0012059LG06+View
Solanum lycopersicumSolyc02g065765.1COBRA-like protein (AHRD V3.3 *** K4B708_SOLLC)SL4.0ch02-View
Solanum lycopersicumSolyc02g089120.4COBRA-like protein (AHRD V3.3 *** K4BC66_SOLLC)SL4.0ch02+View
Solanum lycopersicumSolyc03g114880.3COBRA-like protein (AHRD V3.3 *** A0A2G3A1W9_CAPAN)SL4.0ch03+View
Solanum lycopersicumSolyc03g070440.4COBRA-like protein (AHRD V3.3 *** K4BHH3_SOLLC)SL4.0ch03+View
Schrenkiella parvulaSp2g18070PF04833 - COBRA-like protein (COBRA)ch2-4+View
Schrenkiella parvulaSp6g28480PTHR31673:SF2 - COBRA-LIKE PROTEIN 4ch6-6-View
Solanum pennelliiSopen03g033960Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursorSpenn-ch03+View
Solanum pennelliiSopen02g033910Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursorSpenn-ch02+View
Solanum pennelliiSopen02g015980Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursorSpenn-ch02-View
Solanum tuberosumPGSC0003DMG400001465Protein COBRAST4.03ch02+View
Solanum tuberosumPGSC0003DMG400026565Protein COBRAST4.03ch02-View
Solanum tuberosumPGSC0003DMG400024530Protein COBRAST4.03ch03+View
Selenicereus undatusHund13684Scaffold_33679-View
Selenicereus undatusHund16218Scaffold_33677+View
Theobroma cacaoThecc.04G104000COBRA-like protein 1 precursorChromosome_4+View
Tarenaya hasslerianaTHA.LOC104805521COBRA-like protein 2NW_010961290.1+View
Tripterygium wilfordiiTWI60G0587NC_052246.1+View
Vaccinium macrocarponvmacro18136Similar to BC1L6: COBRA-like protein 1 (Oryza sativa subsp. japonica OX%3D39947)chr3_Vaccinium_macrocarpon_Stevens_v1+View
Vaccinium macrocarponvmacro05622Similar to COB: Protein COBRA (Arabidopsis thaliana OX%3D3702)chr12_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1383G0644CM024070.1+View
Vigna mungoVMungo0464G0462CM024077.1+View
Vitis viniferaGSVIVG01036565001chr14+View