Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold89G27433 scaffold89 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G13860 LG-2 + View
Acer truncatum Atru.chr6.1538 chr6 + View
Arabidopsis lyrata AL1G46210 scaffold_1 - View
Arabidopsis lyrata AL7G35160 scaffold_7 - View
Avicennia marina MSTRG.13895 ScioBoG_18778_HRSCAF_18863 + View
Avicennia marina MSTRG.11903 ScioBoG_17730_HRSCAF_17811 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VSYF54 K17498 - transcription factor SPN1 (SPN1, IWS1) arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.79TK8E K17498 - transcription factor SPN1 (SPN1, IWS1) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G32130 Transcription elongation factor (TFIIS) family protein The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression. IWS1%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: brassinosteroid mediated signaling pathway%2C regulation of RNA elongation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor IIS%2C N-terminal (InterPro:IPR017923)%3B BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT4G19000.1)%3B Has 1384 Blast hits to 1350 proteins in 337 species: Archae - 10%3B Bacteria - 21%3B Metazoa - 458%3B Fungi - 242%3B Plants - 332%3B Viruses - 8%3B Other Eukaryotes - 313 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT4G19000 Transcription elongation factor (TFIIS) family protein The C-terminal portion of this protein has homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. IWS2%3B CONTAINS InterPro DOMAIN/s: Transcription factor IIS%2C N-terminal (InterPro:IPR017923)%3B BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT1G32130.2)%3B Has 1027 Blast hits to 954 proteins in 257 species: Archae - 2%3B Bacteria - 95%3B Metazoa - 273%3B Fungi - 174%3B Plants - 74%3B Viruses - 5%3B Other Eukaryotes - 404 (source: NCBI BLink). Chr4 + View
Citrus clementina Ciclev10000803m.g scaffold_5 + View
Capsella rubella Carub.0001s3045 K17498 - transcription factor SPN1 (SPN1, IWS1) scaffold_1 - View
Capsella rubella Carub.0007s2217 K17498 - transcription factor SPN1 (SPN1, IWS1) scaffold_7 - View
Daucus carota DCAR_008208 hypothetical protein DCARv2_Chr2 - View
Durio zibethinus Duzib205G0674 NW_019168381.1 - View
Erythranthe guttata Migut.E01320 scaffold_5 + View
Erythranthe guttata Migut.A00607 scaffold_1 - View
Eutrema salsugineum Thhalv10027557m.g K17498 - transcription factor SPN1 (SPN1, IWS1) scaffold_1 - View
Fragaria x ananassa FAN18G1509 K17498 - transcription factor SPN1 (SPN1, IWS1) Fvb5-1 + View
Fragaria x ananassa FAN13G1166 K17498 - transcription factor SPN1 (SPN1, IWS1) Fvb5-2 - View
Gossypium hirsutum Gohir.D12G208000 K17498 - transcription factor SPN1 (SPN1, IWS1) D12 - View
Gossypium hirsutum Gohir.A12G205600 KOG1793 - Uncharacterized conserved protein A12 - View
Gossypium raimondii Gorai.008G223500 Chr08 - View
Lonicera japonica Lj8A320T46 GWHAAZE00000008 - View
Medicago truncatula Medtr5g028030 transcription elongation factor (TFIIS) family protein chr5 + View
Petunia axillaris Peaxi162Scf00185g01120 Transcription factor IWS1 Peaxi162Scf00185 + View
Pisum sativum Psat2g139520 TFIIS helical bundle-like domain chr2LG1 + View
Populus trichocarpa Potri.001G135900 K17498 - transcription factor SPN1 (SPN1, IWS1) Chr01 - View
Populus trichocarpa Potri.003G097700 K17498 - transcription factor SPN1 (SPN1, IWS1) Chr03 + View
Phaseolus vulgaris Phvul.002G135200 K17498 - transcription factor SPN1 (SPN1, IWS1) Chr02 - View
Solanum lycopersicum Solyc06g066320.3 Transcription factor IIS (AHRD V3.3 *** A0A200R1D0_9MAGN) SL4.0ch06 - View
Schrenkiella parvula Sp7g17720 K17498 - transcription factor SPN1 (SPN1, IWS1) ch7-4 + View
Theobroma cacao Thecc.03G311200 Transcription elongation factor (TFIIS) family protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104798497 protein IWS1 homolog 2 NW_010968045.1 + View
Vaccinium macrocarpon vmacro00266 Similar to IWS1: Protein IWS1 homolog 1 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View