Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold70G23593 scaffold70 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G10230 LG-3 + View
Acer truncatum Atru.chr2.2908 chr2 - View
Actinidia chinensis Actinidia18742 Lachesis_group9 - View
Actinidia chinensis Actinidia35281 Lachesis_group2 - View
Arabidopsis lyrata AL8G29600 scaffold_8 + View
Avicennia marina MSTRG.15203 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.15022 ScioBoG_19538_HRSCAF_19626 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.BU7NMG K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.14YEDZ K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT5G54270 light-harvesting chlorophyll B-binding protein 3 Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II). light-harvesting chlorophyll B-binding protein 3 (LHCB3)%3B FUNCTIONS IN: structural molecule activity%3B INVOLVED IN: photosynthesis%3B LOCATED IN: light-harvesting complex%2C thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344)%3B BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB05g22123 ChrB05 + View
Brassica carinata BcaC04g20355 ChrC04 - View
Brassica napus A02p10440 A02 - View
Brassica napus A10p11560 A10 + View
Brassica napus C09p44580 C09 + View
Brassica oleracea BolC9t57331H C9 + View
Brassica rapa BraA02t06110Z A02 - View
Brassica rapa BraA10t43251Z A10 + View
Beta vulgaris EL10Ac4g08055 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0016271 PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Malus domestica] Chr5 + View
Camellia sinensis var. sinensis CSS0020122 unnamed protein product [Vitis vinifera] Chr7 + View
Capsicum annuum CAN.G162.106 PGAv.1.6.scaffold162 - View
Cannabis sativa CANSAT11G0033 NC_044377.1 + View
Cicer arietinum L. Ca_01801_v3 Ca_LG1_v3 + View
Corylus avellana Haze_09531 Similar to CAB13: Chlorophyll a-b binding protein 13, chloroplastic (Solanum lycopersicum OX%3D4081) 4 - View
Coffea canephora Cc05_g12720 Chlorophyll a-b binding protein 13, chloroplastic chr5 - View
Citrus clementina Ciclev10009198m.g scaffold_1 - View
Ceratophyllum demersum CDE05G1843 3 + View
Carpinus fangiana Cfa020504 Cfa08 + View
Carya illinoinensis CiPaw.11G176800 PTHR21649//PTHR21649:SF11 - CHLOROPHYLL A/B BINDING PROTEIN // SUBFAMILY NOT NAMED Chr11 - View
Carya illinoinensis CiPaw.12G122900 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Chr12 - View
Citrullus lanatus ClCG10G006490 Chlorophyll a-b binding protein, chloroplastic CG_Chr10 + View
Cucumis melo MELO3C016556.2 Chlorophyll a-b binding protein, chloroplastic chr06 + View
Corchorus olitorius COL.COLO4_09482 Chlorophyll A-B binding protein%2C plant AWUE01014241.1 - View
Carica papaya Cpa.g.sc80.117 supercontig_80 - View
Chenopodium quinoa AUR62015598 CAB13: Chlorophyll a-b binding protein 13, chloroplastic C_Quinoa_Scaffold_1529 + View
Chenopodium quinoa AUR62029310 CAB13: Chlorophyll a-b binding protein 13, chloroplastic C_Quinoa_Scaffold_2939 + View
Capsella rubella Carub.0008s1462 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) scaffold_8 + View
Cucumis sativus L. CsaV3_3G005950 Chlorophyll a-b binding protein, chloroplastic chr3 + View
Davidia involucrata Dinv32281 GWHABJS00000016 - View
Davidia involucrata Dinv08343 GWHABJS00000013 + View
Davidia involucrata Dinv22363 GWHABJS00000001 - View
Durio zibethinus Duzib268G1222 NW_019168270.1 + View
Erigeron canadensis ECA236G1503 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.F01077 Chr06 + View
Eutrema salsugineum Thhalv10014406m.g K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) scaffold_2 - View
Fragaria x ananassa FAN11G1764 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Fvb3-4 + View
Fragaria x ananassa FAN21G2230 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Fvb3-2 - View
Fragaria x ananassa FAN16G1874 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Fvb3-3 - View
Fragaria x ananassa FAN25G0089 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Fvb3-1 + View
Fragaria vesca FvH4_3g21020 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Fvb3 - View
Gossypium hirsutum Gohir.A01G068900 PTHR21649//PTHR21649:SF11 - CHLOROPHYLL A/B BINDING PROTEIN // SUBFAMILY NOT NAMED A01 - View
Gossypium hirsutum Gohir.A04G025800 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) A04 + View
Gossypium hirsutum Gohir.D01G056300 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) D01 - View
Gossypium hirsutum Gohir.D05G361900 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) D05 - View
Glycine max Glyma.13G282000 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Gm13 - View
Glycine max Glyma.12G219300 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Gm12 + View
Gossypium raimondii Gorai.009G430800 Chr09 + View
Gossypium raimondii Gorai.002G076400 Chr02 - View
Lupinus albus Lalb_Chr01g0006391 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Lalb_Chr01 + View
Lotus japonicus Lj3g0005364 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) chr3 + View
Lotus japonicus Lj3g0005863 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) chr3 + View
Lonicera japonica Lj2C309T7 GWHAAZE00000002 - View
Lonicera japonica Lj8A160T68 GWHAAZE00000008 - View
Lonicera japonica Lj1C853T19 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_7_106541 Lsat_1_v8_lg_7 - View
Magnolia biondii MBI02_g05994_MAGBIO AED:0.01 Chr02 - View
Malus domestica MD11G1236900 light-harvesting chlorophyll B-binding protein 3 Chr11 + View
Malus domestica MD03G1218900 light-harvesting chlorophyll B-binding protein 3 Chr03 + View
Manihot esculenta Manes.03G116700 Chromosome03 - View
Medicago truncatula Medtr2g081090 light-harvesting complex I chlorophyll A/B-binding protein chr2 - View
Nelumbo nucifera Nn1g03912 chr1 + View
Nelumbo nucifera Nn1g06753 chr1 - View
Nicotiana tabacum Nitab4.5_0000297g0150 Chlorophyll a/b binding protein domain, Chlorophyll A-B binding protein, Chlorophyll A-B binding protein, plant Nitab4.5_0000297 - View
Olea europaea Oeu055682.1 chr6 - View
Olea europaea Oeu019365.1 chr5 - View
Petunia axillaris Peaxi162Scf00000g51016 Chlorophyll a-b binding protein 13, chloroplastic Peaxi162Scf00000 - View
Petunia axillaris Peaxi162Scf01216g00053 Chlorophyll a-b binding protein 13, chloroplastic Peaxi162Scf01216 - View
Punica granatum PGR031G1297 NC_045127.1 + View
Prunus persica Prupe.4G190500 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Pp04 - View
Pisum sativum Psat5g246800 Chlorophyll A-B binding protein chr5LG3 + View
Papaver somniferum PSO541G6038 NC_039363.1 - View
Papaver somniferum PSO541G3928 NC_039363.1 - View
Papaver somniferum PSO675G4984 NC_039358.1 + View
Populus trichocarpa Potri.011G126700 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Chr11 - View
Populus trichocarpa Potri.001G407100 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) Chr01 - View
Quercus lobata QL08p017729 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0036051 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0038600 chr04 - View
Rhododendron simsii RhsimUnG0258600 ctg618 + View
Salvia bowleyana SalBow8G3705 GWHASIU00000004 + View
Salix brachista Sabra11G0110800 GWHAAZH00000011 - View
Salix brachista Sabra16G0268500 GWHAAZH00000016 - View
Simmondsia chinensis Sc16g0006750 GWHAASQ00000016 + View
Solanum lycopersicum Solyc07g063600.3 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3C388_CAPCH) SL4.0ch07 - View
Schrenkiella parvula Sp6g16310 K08914 - light-harvesting complex II chlorophyll a/b binding protein 3 (LHCB3) ch6-6 + View
Solanum pennellii Sopen07g031780 Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II). | light-harvesting chlorophyll B-binding protein 3 (LHCB3) | FUNCTIONS IN: structural molecule activity | INVOLVED IN: photosynthesis | LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein | BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400008564 Chlorophyll a-b binding protein 13, chloroplastic ST4.03ch12 - View
Solanum tuberosum PGSC0003DMG400019248 Chlorophyll a-b binding protein 13, chloroplastic ST4.03ch07 - View
Selenicereus undatus Hund02187 Scaffold_33678 + View
Trochodendron aralioides TAR626G0725 group3 + View
Theobroma cacao Thecc.07G070900 Light-harvesting chlorophyll B-binding protein 3 Chromosome_7 + View
Tarenaya hassleriana THA.LOC104799908 chlorophyll a-b binding protein 3%2C chloroplastic NW_010968712.1 + View
Trifolium pratense TPR.G32863 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI39G0649 NC_052250.1 + View
Tripterygium wilfordii TWI38G1297 NC_052252.1 + View
Vigna mungo VMungo1127G0814 CM024076.1 + View
Vigna mungo VMungo1080G1663 CM024079.1 + View
Vanilla planifolia HPP92_014069 Chlorophyll a-b binding protein, chloroplastic *** CM028155.1 - View
Vitis vinifera GSVIVG01014439001 chr19 - View
Zea mays Zm00001eb106810 Zm00001e010547 Chlorophyll a-b binding protein, chloroplastic Chlorophyll a-b binding protein CP29.1 chloroplastic 2 - View