Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold34G13827 scaffold34 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.3003 chr6 + View
Acer truncatum Atru.chr2.2667 chr2 - View
Actinidia chinensis Actinidia09857 Lachesis_group5 + View
Actinidia chinensis Actinidia09677 Lachesis_group5 - View
Actinidia chinensis Actinidia12815 Lachesis_group19 + View
Actinidia chinensis Actinidia39457 Lachesis_group17 - View
Actinidia chinensis Actinidia05628 Lachesis_group20 - View
Arabidopsis lyrata AL8G28720 scaffold_8 + View
Avicennia marina MSTRG.6838 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.15888 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.12914 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.7331 ScioBoG_102840_HRSCAF_103099 - View
Amaranthus hybridus Ah.06g184030 AmaHy_arrow1_Scaffold_6 + View
Amaranthus hybridus Ah.14g089430 AmaHy_arrow1_Scaffold_14 - View
Amaranthus hybridus Ah.04g164920 AmaHy_arrow1_Scaffold_4 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0ZYF06 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I8ASYK PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.10 + View
Brassica napus A01p18660 A01 + View
Beta vulgaris EL10Ac4g08148 PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0014616 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera] Contig815 + View
Camellia sinensis var. sinensis CSS0027161 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera] Chr7 - View
Camellia sinensis var. sinensis CSS0003908 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera] Contig361 + View
Cannabis sativa CANSAT56G0930 NC_044371.1 - View
Corylus avellana Haze_06478 Similar to RMA1H1: E3 ubiquitin-protein ligase RMA1H1 (Capsicum annuum OX%3D4072) 2 + View
Corylus avellana Haze_09414 Similar to RMA3: E3 ubiquitin-protein ligase RMA3 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g07090 E3 ubiquitin-protein ligase RMA1H1 chr5 - View
Coffea canephora Cc05_g12150 Putative E3 ubiquitin-protein ligase RMA1H1 chr5 + View
Coffea canephora Cc02_g13290 Putative E3 ubiquitin-protein ligase RMA1H1 chr2 - View
Citrus clementina Ciclev10009229m.g scaffold_1 + View
Citrus clementina Ciclev10016469m.g scaffold_2 - View
Carpinus fangiana Cfa000436 Cfa01 - View
Carpinus fangiana Cfa020600 Cfa08 + View
Carpinus fangiana Cfa014606 Cfa06 - View
Carya illinoinensis CiPaw.10G048000 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Chr10 - View
Carya illinoinensis CiPaw.03G176400 PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED Chr03 - View
Carya illinoinensis CiPaw.11G168200 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Chr11 - View
Carya illinoinensis CiPaw.12G117400 PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 Chr12 - View
Citrullus lanatus ClCG11G018130 RING finger protein 185 CG_Chr11 + View
Citrullus lanatus ClCG01G022960 RING finger protein 5 CG_Chr01 - View
Cucumis melo MELO3C007285.2 E3 ubiquitin-protein ligase RMA1H1-like chr08 + View
Cucumis melo MELO3C016706.2 E3 ubiquitin-protein ligase RMA3 chr07 - View
Cucumis melo MELO3C002598.2 E3 ubiquitin-protein ligase RMA1H1-like chr12 + View
Corchorus olitorius COL.COLO4_09408 Zinc finger%2C RING-type AWUE01014232.1 + View
Carica papaya Cpa.g.sc80.52 supercontig_80 - View
Chenopodium quinoa AUR62017010 RMA1H1: E3 ubiquitin-protein ligase RMA1H1 C_Quinoa_Scaffold_3787 - View
Cucumis sativus L. CsaV3_1G012230 E3 ubiquitin-protein ligase RMA1H1-like chr1 - View
Cucumis sativus L. CsaV3_6G050110 E3 ubiquitin-protein ligase RMA1H1-like chr6 - View
Cucumis sativus L. CsaV3_4G033770 E3 ubiquitin-protein ligase rma1h1-like protein chr4 + View
Daucus carota DCAR_017146 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_004077 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv08303 GWHABJS00000013 - View
Davidia involucrata Dinv07555 GWHABJS00000020 + View
Davidia involucrata Dinv23646 GWHABJS00000001 + View
Durio zibethinus Duzib192G0678 NW_019168037.1 - View
Durio zibethinus Duzib170G0669 NW_019167871.1 - View
Durio zibethinus Duzib213G0152 NW_019167993.1 - View
Durio zibethinus Duzib235G1451 NW_019167982.1 + View
Durio zibethinus Duzib160G0269 NW_019168015.1 + View
Durio zibethinus Duzib052G1247 NW_019167849.1 + View
Erigeron canadensis ECA236G2819 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA246G4988 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.D00626 Chr04 + View
Eucalyptus grandis Eucgr.F01104 Chr06 - View
Eucalyptus grandis Eucgr.E03315 Chr05 + View
Erythranthe guttata Migut.M01146 scaffold_13 + View
Erythranthe guttata Migut.H01931 scaffold_8 - View
Erythranthe guttata Migut.M00816 scaffold_13 + View
Fragaria x ananassa FAN25G3867 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Fvb3-1 + View
Fragaria x ananassa FAN21G3819 PF03330//PF13923 - Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2) Fvb3-2 + View
Fragaria vesca FvH4_6g26170 PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED Fvb6 - View
Fragaria vesca FvH4_3g09330 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Fvb3 + View
Fragaria vesca FvH4_3g20120 PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 Fvb3 - View
Gossypium hirsutum Gohir.D01G051600 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 D01 + View
Gossypium hirsutum Gohir.D10G026200 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED D10 - View
Gossypium hirsutum Gohir.A10G025500 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED A10 - View
Gossypium hirsutum Gohir.D05G358100 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 D05 + View
Gossypium hirsutum Gohir.A01G064500 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 A01 + View
Gossypium hirsutum Gohir.A04G029100 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 A04 - View
Glycine max Glyma.15G073700 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Gm15 - View
Glycine max Glyma.12G151200 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Gm12 - View
Glycine max Glyma.07G196000 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Gm07 - View
Glycine max Glyma.13G239500 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.13G179900 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.13G297700 PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED Gm13 + View
Gossypium raimondii Gorai.002G071500 Chr02 + View
Gossypium raimondii Gorai.009G390700 Chr09 + View
Gossypium raimondii Gorai.011G027500 Chr11 - View
Lupinus albus Lalb_Chr14g0366871 PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED Lalb_Chr14 - View
Lupinus albus Lalb_Chr15g0089811 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Lalb_Chr15 + View
Lupinus albus Lalb_Chr19g0134231 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Lalb_Chr19 + View
Lupinus albus Lalb_Chr18g0059651 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Lalb_Chr18 + View
Lupinus albus Lalb_Chr25g0286461 PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 Lalb_Chr25 + View
Lupinus albus Lalb_Chr03g0030601 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Lalb_Chr03 - View
Lotus japonicus Lj4g0007698 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED chr4 + View
Lotus japonicus Lj6g0011812 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED chr6 + View
Lotus japonicus Lj3g0017280 PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED chr3 + View
Lotus japonicus Lj3g0009712 PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 chr3 - View
Lonicera japonica Lj1P845T24 GWHAAZE00000001 + View
Lonicera japonica Lj8P156T32 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_9_96860 Lsat_1_v8_lg_9 - View
Malus domestica MD11G1245000 RING membrane-anchor 1 Chr11 + View
Malus domestica MD17G1241200 RING membrane-anchor 1 Chr17 + View
Malus domestica MD05G1313600 RING membrane-anchor 1 Chr05 + View
Malus domestica MD03G1226000 RING membrane-anchor 1 Chr03 - View
Manihot esculenta Manes.03G111400 Chromosome03 + View
Manihot esculenta Manes.15G086400 Chromosome15 - View
Manihot esculenta Manes.17G045000 Chromosome17 - View
Manihot esculenta Manes.13G147200 Chromosome13 + View
Manihot esculenta Manes.16G026800 Chromosome16 - View
Medicago truncatula Medtr2g013550 E3 ubiquitin-protein ligase RMA1H1-like protein chr2 - View
Medicago truncatula Medtr4g088870 E3 ubiquitin-protein ligase RMA1H1-like protein chr4 + View
Nelumbo nucifera Nn1g04069 chr1 - View
Nicotiana tabacum Nitab4.5_0002383g0090 Zinc finger, RING-type, Zinc finger, RING-type, conserved site, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0002383 + View
Nicotiana tabacum Nitab4.5_0003688g0070 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0003688 - View
Nicotiana tabacum Nitab4.5_0000207g0130 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, conserved site Nitab4.5_0000207 + View
Olea europaea Oeu019332.1 chr5 + View
Petunia axillaris Peaxi162Scf00000g04012 RING/U-box superfamily protein Peaxi162Scf00000 + View
Petunia axillaris Peaxi162Scf00069g01319 expansin 12 Peaxi162Scf00069 - View
Petunia axillaris Peaxi162Scf00027g00271 RING membrane-anchor 3 Peaxi162Scf00027 + View
Punica granatum PGR042G0032 NC_045130.1 + View
Punica granatum PGR004G0207 NC_045131.1 + View
Punica granatum PGR042G3404 NC_045130.1 - View
Prunus persica Prupe.4G046100 Pp04 - View
Prunus persica Prupe.4G183300 PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 Pp04 + View
Papaver somniferum PSO541G3008 NC_039363.1 + View
Papaver somniferum PSO832G4164 NC_039367.1 + View
Papaver somniferum PSO210G2277 NC_039359.1 + View
Papaver somniferum PSO675G0566 NC_039358.1 - View
Populus trichocarpa Potri.011G051800 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Chr11 - View
Populus trichocarpa Potri.001G401600 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Chr01 + View
Populus trichocarpa Potri.004G042700 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Chr04 - View
Populus trichocarpa Potri.011G120800 PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 Chr11 + View
Phaseolus vulgaris Phvul.005G104200 PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED Chr05 + View
Phaseolus vulgaris Phvul.006G185900 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Chr06 + View
Phaseolus vulgaris Phvul.002G228600 PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED Chr02 - View
Quercus lobata QL05p040106 5 - View
Quercus lobata QL08p038559 8 - View
Quercus lobata QL08p020973 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0033921 RcHm_v2.0_Chr5 - View
Rosa chinensis RcHm_v2.0_Chr5g0008261 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0068300 chr04 - View
Rhododendron simsii Rhsim04G0020400 chr04 - View
Rhododendron simsii Rhsim13G0177400 chr13 - View
Salix brachista Sabra04G0026500 GWHAAZH00000004 - View
Salix brachista Sabra16G0263600 GWHAAZH00000016 + View
Salix brachista Sabra11G0104800 GWHAAZH00000011 + View
Simmondsia chinensis Sc03g0009910 GWHAASQ00000003 - View
Sechium edule Sed0019527 LG01 - View
Sechium edule Sed0019254 LG10 + View
Sechium edule Sed0000738 LG14 - View
Solanum lycopersicum Solyc10g006960.3 E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) SL4.0ch10 - View
Solanum lycopersicum Solyc07g054080.3 E3 ubiquitin-protein ligase RMA1H1 (AHRD V3.3 *** A0A2G2WDK5_CAPBA) SL4.0ch07 + View
Solanum lycopersicum Solyc07g063200.3 E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) SL4.0ch07 + View
Solanum lycopersicum Solyc12g013800.3 E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) SL4.0ch12 - View
Solanum lycopersicum Solyc02g078320.3 E3 ubiquitin-protein ligase RMA1H1-like (AHRD V3.3 *** A0A2I4ELD1_9ROSI) SL4.0ch02 + View
Solanum pennellii Sopen07g028020 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. | RING membrane-anchor 1 (RMA1) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 2 Spenn-ch07 + View
Solanum pennellii Sopen12g007110 Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 Spenn-ch12 - View
Solanum pennellii Sopen10g002870 Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 Spenn-ch10 - View
Solanum pennellii Sopen07g031390 Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 Spenn-ch07 + View
Solanum pennellii Sopen02g023160 Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400025033 Rnf5 ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400015359 Rnf5 ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400029719 Rnf5 ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400018307 E3 ubiquitin-protein ligase RMA1H1 ST4.03ch07 - View
Selenicereus undatus Hund21228 Scaffold_33680 + View
Trochodendron aralioides TAR629G1163 group0 - View
Trochodendron aralioides TAR626G1882 group3 - View
Trochodendron aralioides TAR627G1098 group6 + View
Theobroma cacao Thecc.07G082600 RING membrane-anchor 3 Chromosome_7 - View
Theobroma cacao Thecc.02G178700 RING membrane-anchor 1 Chromosome_2 - View
Theobroma cacao Thecc.06G188700 RING membrane-anchor 1 Chromosome_6 + View
Tripterygium wilfordii TWI38G1286 NC_052252.1 + View
Tripterygium wilfordii TWI38G0907 NC_052252.1 - View
Tripterygium wilfordii TWI39G0858 NC_052250.1 - View
Tripterygium wilfordii TWI38G2339 NC_052252.1 - View
Vaccinium macrocarpon vmacro11850 Similar to RMA1H1: E3 ubiquitin-protein ligase RMA1H1 (Capsicum annuum OX%3D4072) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G0725 CM024076.1 + View
Vigna mungo VMungo0540G1060 CM024075.1 - View
Vitis vinifera GSVIVG01014361001 chr19 + View