Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold87G26951 scaffold87 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G640 LG-1 + View
Acer truncatum Atru.chr9.2309 chr9 - View
Actinidia chinensis Actinidia37654 Lachesis_group13 - View
Actinidia chinensis Actinidia31184 Lachesis_group12 - View
Arabidopsis lyrata AL1G26310 scaffold_1 - View
Avicennia marina MSTRG.2357 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.675 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.13403 ScioBoG_18778_HRSCAF_18863 + View
Avicennia marina MSTRG.23958 ScioBoG_3895_HRSCAF_3912 - View
Amaranthus hybridus Ah.02g113240 Probable pectate lyase P59 (EC 4.2.2.2) AmaHy_arrow1_Scaffold_2 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RB3340 4.2.2.2 - Pectate lyase / PPase-N arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PT6QFX PTHR31683//PTHR31683:SF14//PTHR34573//PTHR34573:SF1 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // FAMILY NOT NAMED // THIOL-DISULFIDE OXIDOREDUCTASE LTO1 arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X34XYP K01728 - pectate lyase (pel) arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SR4TTD PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT1G14420 Pectate lyase family protein AT59%3B FUNCTIONS IN: lyase activity%2C pectate lyase activity%3B INVOLVED IN: plant-type cell wall organization%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectate lyase%2C N-terminal (InterPro:IPR007524)%2C AmbAllergen (InterPro:IPR018082)%2C Pectate lyase/Amb allergen (InterPro:IPR002022)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1)%3B Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2%3B Bacteria - 722%3B Metazoa - 0%3B Fungi - 281%3B Plants - 703%3B Viruses - 0%3B Other Eukaryotes - 28 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB08g34394 ChrB08 - View
Brassica carinata BcaC04g18987 ChrC04 - View
Brassica carinata BcaC09g47643 ChrC09 - View
Brassica napus A06p10440 A06 - View
Brassica napus C08p45750 C08 + View
Brassica napus C07p33330 C07 + View
Brassica napus A09p62160 A09 + View
Brassica rapa BraA06t27238Z A06 - View
Brassica rapa BraA06t24224Z A06 - View
Beta vulgaris EL10Ac6g13157 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Chr6_EL10_PGA_scaffold0 + View
Beta vulgaris EL10Ac5g10948 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0048783 putative pectate lyase 7 [Morus notabilis] Chr6 + View
Capsicum annuum CAN.G628.38 PGAv.1.6.scaffold628 + View
Cicer arietinum L. Ca_21845_v3 Ca_LG7_v3 - View
Corylus avellana Haze_12043 Similar to LAT59: Probable pectate lyase P59 (Solanum lycopersicum OX%3D4081) 9 - View
Coffea canephora Cc11_g13410 Pectate lyase chr11 - View
Citrus clementina Ciclev10020193m.g scaffold_3 - View
Carpinus fangiana Cfa007515 Cfa03 + View
Carpinus fangiana Cfa009026 Cfa03 - View
Cardamine hirsuta CARHR014860 Pectate lyase family protein Chr1 - View
Carya illinoinensis CiPaw.05G139300 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Chr05 - View
Carya illinoinensis CiPaw.03G029700 PTHR31683//PTHR31683:SF14//PTHR31683:SF7 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // PECTATE LYASE 19-RELATED Chr03 - View
Carya illinoinensis CiPaw.06G081100 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Chr06 + View
Citrullus lanatus ClCG05G024540 Pectate lyase family protein CG_Chr05 - View
Cucumis melo MELO3C012072.2 Pectate lyase chr10 - View
Carica papaya Cpa.g.sc5.270 supercontig_5 - View
Chenopodium quinoa AUR62028829 Pectate lyase C_Quinoa_Scaffold_2837 - View
Chenopodium quinoa AUR62005732 At3g01270: Probable pectate lyase 7 C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62021734 LAT59: Probable pectate lyase P59 C_Quinoa_Scaffold_1675 - View
Capsella rubella Carub.0001s1413 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_5G032410 Pectate lyase chr5 + View
Daucus carota DCAR_007134 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv06517 GWHABJS00000012 - View
Davidia involucrata Dinv19920 GWHABJS00000006 - View
Davidia involucrata Dinv34206 GWHABJS00000008 + View
Durio zibethinus Duzib205G0523 NW_019168381.1 + View
Durio zibethinus Duzib084G0038 NW_019167827.1 + View
Durio zibethinus Duzib248G1631 NW_019168048.1 + View
Erigeron canadensis ECA246G0337 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA246G2524 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.G02541 Chr07 - View
Erythranthe guttata Migut.H00891 scaffold_8 + View
Erythranthe guttata Migut.E00111 scaffold_5 - View
Erythranthe guttata Migut.L01335 scaffold_12 - View
Fragaria x ananassa FAN22G0892 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Fvb4-1 - View
Fragaria x ananassa FAN02G2680 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Fvb6-4 - View
Fragaria x ananassa FAN04G0106 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Fvb5-4 - View
Fragaria x ananassa FAN12G4332 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Fvb4-3 + View
Fragaria vesca FvH4_5g15430 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Fvb5 - View
Gossypium hirsutum Gohir.D05G317300 PTHR31683:SF20 - PECTATE LYASE 1-RELATED D05 + View
Glycine max Glyma.19G020200 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Gm19 + View
Glycine max Glyma.02G020600 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Gm02 + View
Glycine max Glyma.04G173900 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Gm04 - View
Glycine max Glyma.08G296900 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Gm08 + View
Glycine max Glyma.18G255900 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Gm18 + View
Glycine max Glyma.01G042700 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Gm01 + View
Gossypium raimondii Gorai.009G339700 Chr09 + View
Lupinus albus Lalb_Chr17g0340401 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Lalb_Chr17 + View
Lupinus albus Lalb_Chr21g0318951 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Lalb_Chr21 + View
Lupinus albus Lalb_Chr10g0098001 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Lalb_Chr10 + View
Lupinus albus Lalb_Chr07g0177891 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Lalb_Chr07 + View
Lotus japonicus Lj2g0004378 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) chr2 + View
Lonicera japonica Lj7A401T74 GWHAAZE00000007 - View
Lonicera japonica Lj6P793T70 GWHAAZE00000006 - View
Lonicera japonica Lj5A115T71 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_3_51401 Lsat_1_v8_lg_3 + View
Malus domestica MD14G1195000 Pectate lyase family protein Chr14 + View
Malus domestica MD16G1078000 Pectate lyase family protein Chr16 - View
Malus domestica MD13G1078400 Pectate lyase family protein Chr13 - View
Malus domestica MD09G1047400 Pectate lyase family protein Chr09 + View
Manihot esculenta Manes.05G097300 Chromosome05 + View
Manihot esculenta Manes.01G189700 Chromosome01 - View
Nicotiana tabacum Nitab4.5_0000269g0150 Pectate lyase/Amb allergen, Pectin lyase fold/virulence factor, Pectin lyase fold, Pectate lyase, N-terminal, AmbAllergen Nitab4.5_0000269 + View
Nicotiana tabacum Nitab4.5_0000141g0370 Pectin lyase fold/virulence factor, Pectate lyase/Amb allergen, Pectate lyase, N-terminal, Pectin lyase fold, AmbAllergen Nitab4.5_0000141 - View
Petunia axillaris Peaxi162Scf00026g02510 Pectin lyase-like superfamily protein Peaxi162Scf00026 + View
Petunia axillaris Peaxi162Scf00209g00330 Pectin lyase-like superfamily protein Peaxi162Scf00209 - View
Punica granatum PGR119G1359 NC_045132.1 - View
Prunus persica Prupe.1G268500 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Pp01 + View
Populus trichocarpa Potri.017G078400 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Chr17 + View
Phaseolus vulgaris Phvul.004G026400 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Chr04 + View
Phaseolus vulgaris Phvul.002G065800 4.2.2.2 - Pectate lyase / PPase-N Chr02 + View
Phaseolus vulgaris Phvul.004G059200 PTHR31683:SF29 - PECTATE LYASE 11-RELATED Chr04 + View
Phaseolus vulgaris Phvul.003G069100 4.2.2.2 - Pectate lyase / PPase-N Chr03 - View
Phaseolus vulgaris Phvul.008G043600 4.2.2.2 - Pectate lyase / PPase-N Chr08 - View
Quercus lobata QL03p065544 3 - View
Rhododendron simsii Rhsim08G0066400 chr08 + View
Rhododendron simsii Rhsim12G0130200 chr12 + View
Rhododendron simsii Rhsim12G0057600 chr12 + View
Salvia bowleyana SalBow8G1455 GWHASIU00000004 + View
Salvia bowleyana SalBow2G2225 GWHASIU00000007 + View
Simmondsia chinensis Sc14g0008340 GWHAASQ00000014 - View
Simmondsia chinensis Sc11g0001720 GWHAASQ00000011 + View
Simmondsia chinensis Sc04g0008430 GWHAASQ00000004 - View
Sechium edule Sed0011821 LG06 - View
Solanum lycopersicum Solyc05g007080.4 Pectate lyase (AHRD V3.3 *** A0A2G2YDT9_CAPAN) SL4.0ch05 + View
Solanum lycopersicum Solyc06g071020.3 Pectate lyase (AHRD V3.3 *** A0A2G3C9U0_CAPCH) SL4.0ch06 + View
Schrenkiella parvula Sp1g12790 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED ch1-1 - View
Solanum pennellii Sopen02g032420 Pectate lyase family protein | FUNCTIONS IN: lyase activity, pectate lyase activity | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectate lyase, N-terminal , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectate lyase family protein Spenn-ch02 + View
Solanum pennellii Sopen05g003050 AT59 | FUNCTIONS IN: lyase activity, pectate lyase activity | INVOLVED IN: plant-type cell wall organization | LOCATED IN: endomembrane system | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectate lyase, N-terminal , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectate lyase family protein Spenn-ch05 + View
Solanum pennellii Sopen06g027320 Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily), Pectate lyase family protein | FUNCTIONS IN: lyase activity, pectate lyase activity | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectate lyase, N-terminal , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectate lyase family protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG402017626 Pectate lyase ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400033070 Pectate lyase ST4.03ch06 + View
Theobroma cacao Thecc.02G354500 Pectate lyase family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104805137 probable pectate lyase 3 isoform X1 NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104801785 probable pectate lyase 3 NW_010970030.1 + View
Tarenaya hassleriana THA.LOC104805450 probable pectate lyase 19 NW_010961290.1 - View
Tripterygium wilfordii TWI60G0675 NC_052246.1 - View
Tripterygium wilfordii TWI18G0076 NC_052241.1 - View
Tripterygium wilfordii TWI75G0157 NC_052253.1 + View
Utricularia gibba unitig_62.g23685 unitig_62 + View
Vaccinium macrocarpon vmacro01231 Similar to LAT59: Probable pectate lyase P59 (Solanum lycopersicum OX%3D4081) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18209 Similar to LAT59: Probable pectate lyase P59 (Solanum lycopersicum OX%3D4081) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16330 Similar to LAT59: Probable pectate lyase P59 (Solanum lycopersicum OX%3D4081) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0715 CM024072.1 - View
Vitis vinifera GSVIVG01008053001 chr17 + View
Vitis vinifera GSVIVG01020068001 chr1 + View