Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold32G13261 scaffold32 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16450 LG-6 + View
Arabidopsis lyrata AL4G10220 scaffold_4 - View
Arabidopsis lyrata AL3G49230 scaffold_3 + View
Arabidopsis lyrata AL7G10620 scaffold_7 - View
Avicennia marina MSTRG.16880 ScioBoG_19743_HRSCAF_19834 + View
Amaranthus hybridus Ah.01g022620 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyp) (Cyclosporin A-binding protein) (Rotamase) (allergen Cat r 1) AmaHy_arrow1_Scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LG5WAH PTHR11071:SF213 - PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT2G16600 rotamase CYP 3 Encodes cytosolic cyclophilin ROC3. rotamase CYP 3 (ROC3)%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%2C signal transduction%3B LOCATED IN: cytosol%2C chloroplast%2C plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%3B BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1)%3B Has 16363 Blast hits to 16328 proteins in 2676 species: Archae - 108%3B Bacteria - 6734%3B Metazoa - 2930%3B Fungi - 1383%3B Plants - 1279%3B Viruses - 4%3B Other Eukaryotes - 3925 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%3B BEST Arabidopsis thaliana protein match is: rotamase CYP 1 (TAIR:AT4G38740.1)%3B Has 16606 Blast hits to 16571 proteins in 2692 species: Archae - 108%3B Bacteria - 6886%3B Metazoa - 2917%3B Fungi - 1384%3B Plants - 1286%3B Viruses - 4%3B Other Eukaryotes - 4021 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G38740 rotamase CYP 1 Encodes cytosolic cyclophilin ROC1. rotamase CYP 1 (ROC1)%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%2C response to cadmium ion%2C signal transduction%3B LOCATED IN: cytosol%2C apoplast%2C plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%3B BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1)%3B Has 16514 Blast hits to 16480 proteins in 2670 species: Archae - 108%3B Bacteria - 6825%3B Metazoa - 2927%3B Fungi - 1383%3B Plants - 1289%3B Viruses - 4%3B Other Eukaryotes - 3978 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT4G34870 rotamase cyclophilin 5 belongs to cyclophilin family rotamase cyclophilin 5 (ROC5)%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%2C signal transduction%3B LOCATED IN: cytosol%2C apoplast%2C chloroplast%2C plasma membrane%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%3B BEST Arabidopsis thaliana protein match is: rotamase CYP 3 (TAIR:AT2G16600.1)%3B Has 16787 Blast hits to 16755 proteins in 2701 species: Archae - 108%3B Bacteria - 6977%3B Metazoa - 2940%3B Fungi - 1375%3B Plants - 1301%3B Viruses - 4%3B Other Eukaryotes - 4082 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0810G211 AmTr_v1.0_scaffold00041 + View
Brassica carinata BcaB03g12222 ChrB03 - View
Brassica carinata BcaC01g00252 ChrC01 - View
Brassica napus A08p24040 A08 + View
Brassica napus C03p77270 C03 - View
Brassica oleracea BolC3t19982H C3 - View
Brassica oleracea BolC7t46774H C7 + View
Brassica rapa BraA08t34360Z A08 + View
Brassica rapa BraA06t27760Z A06 + View
Beta vulgaris EL10Ac9g21434 KOG0865 - Cyclophilin type peptidyl-prolyl cis-trans isomerase Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0010945 putative cyclophilin [Aralia elata] Chr6 + View
Camellia sinensis var. sinensis CSS0024710 cyclophilin [Citrus tamurana] Chr3 - View
Capsicum annuum CAN.G588.29 PGAv.1.6.scaffold588 + View
Cannabis sativa CANSAT25G2615 NC_044370.1 + View
Coffea canephora Cc10_g01600 Peptidyl-prolyl cis-trans isomerase chr10 - View
Citrus clementina Ciclev10029386m.g scaffold_8 + View
Ceratophyllum demersum CDE05G2557 3 + View
Carpinus fangiana Cfa005188 Cfa02 + View
Cardamine hirsuta CARHR106810 Peptidyl-prolyl cis-trans isomerase Chr3 + View
Cardamine hirsuta CARHR243160 Peptidyl-prolyl cis-trans isomerase Chr7 + View
Cardamine hirsuta CARHR111960 Peptidyl-prolyl cis-trans isomerase Chr4 - View
Cardamine hirsuta CARHR294440 Peptidyl-prolyl cis-trans isomerase scaffold1271 - View
Carya illinoinensis CiPaw.05G077600 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Chr05 + View
Citrullus lanatus ClCG02G004290 Peptidyl-prolyl cis-trans isomerase CG_Chr02 - View
Cucumis melo MELO3C013375.2 peptidyl-prolyl cis-trans isomerase chr01 - View
Capsella rubella Carub.0007s0060 PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED scaffold_7 - View
Capsella rubella Carub.0003s3037 PTHR11071:SF264 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP19-1 scaffold_3 + View
Capsella rubella Carub.0004s0015 PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_7G000820 Peptidyl-prolyl cis-trans isomerase chr7 + View
Daucus carota DCAR_013872 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv41973 GWHABJS00000002 + View
Davidia involucrata Dinv04964 GWHABJS00000005 - View
Durio zibethinus Duzib248G1548 NW_019168048.1 + View
Durio zibethinus Duzib052G0274 NW_019167849.1 + View
Durio zibethinus Duzib132G0734 NW_019167915.1 - View
Erigeron canadensis ECA234G3250 Conyza_canadensis_scaffold:4 + View
Erythranthe guttata Migut.N01299 scaffold_14 + View
Eutrema salsugineum Thhalv10026397m.g K01802 - peptidylprolyl isomerase (E5.2.1.8) scaffold_1 - View
Eutrema salsugineum Thhalv10000350m.g K01802 - peptidylprolyl isomerase (E5.2.1.8) scaffold_15 - View
Fragaria x ananassa FAN27G3207 PTHR11071:SF295 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-4 Fvb2-1 - View
Fragaria x ananassa FAN24G0972 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Fvb2-2 + View
Fragaria x ananassa FAN20G0654 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Fvb2-3 + View
Fragaria x ananassa FAN15G2053 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Fvb2-4 - View
Gossypium hirsutum Gohir.A04G122701 PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED A04 - View
Gossypium hirsutum Gohir.A01G164200 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED A01 + View
Gossypium hirsutum Gohir.D12G033300 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.D01G156100 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED D01 + View
Glycine max Glyma.06G004000 PTHR11071//PTHR11071:SF248 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Gm06 - View
Gossypium raimondii Gorai.008G034100 Chr08 + View
Gossypium raimondii Gorai.002G193600 Chr02 + View
Helianthus annuus HanXRQChr17g0553731 Probable peptidyl-prolyl cis-trans isomerase HanXRQChr17 - View
Lotus japonicus Lj1g0007514 PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED chr1 + View
Lonicera japonica Lj4P797T25 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_8_123740 PTHR11071:SF203 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_3_45700 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_8_125940 PTHR11071:SF295 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-4 Lsat_1_v8_lg_8 + View
Magnolia biondii MBI05_g07504_MAGBIO AED:0.07 Chr05 + View
Malus domestica MD10G1119700 rotamase CYP 3 Chr10 + View
Manihot esculenta Manes.18G013200 Chromosome18 - View
Medicago truncatula Medtr3g117750 peptidyl-prolyl cis-trans isomerase chr3 + View
Nicotiana tabacum Nitab4.5_0000956g0210 Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain, Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site, Cyclophilin-type peptidyl-prolyl cis-trans isomerase Nitab4.5_0000956 - View
Nicotiana tabacum Nitab4.5_0000283g0060 Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain, Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site, Cyclophilin-type peptidyl-prolyl cis-trans isomerase Nitab4.5_0000283 - View
Olea europaea Oeu060418.1 chr15 - View
Olea europaea Oeu055657.1 chr15 + View
Prunus persica Prupe.8G161100 PTHR11071//PTHR11071:SF250 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Pp08 + View
Papaver somniferum PSO700G0372 NW_020620825.1 + View
Papaver somniferum PSO170G3493 NC_039360.1 + View
Populus trichocarpa Potri.009G130100 PTHR11071//PTHR11071:SF295 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-4 Chr09 + View
Populus trichocarpa Potri.004G168800 PTHR11071:SF264 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP19-1 Chr04 + View
Quercus lobata QL11p047665 11 + View
Rhododendron simsii Rhsim05G0061800 chr05 - View
Rhododendron simsii Rhsim11G0188100 chr11 + View
Salvia bowleyana SalBow6G0853 GWHASIU00000002 - View
Salix brachista Sabra09G0099500 GWHAAZH00000009 + View
Salix brachista Sabra04G0113200 GWHAAZH00000004 + View
Sechium edule Sed0016958 LG05 - View
Sechium edule Sed0016754 LG04 - View
Solanum lycopersicum Solyc10g054910.1 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G2W9L6_CAPBA) SL4.0ch10 + View
Solanum lycopersicum Solyc01g111170.3 cyclophilin SL4.0ch01 + View
Schrenkiella parvula Sp3g30130 PTHR11071//PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED ch3-5 - View
Schrenkiella parvula Sp7g32640 PTHR11071//PTHR11071:SF295 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-4 ch7-5 + View
Schrenkiella parvula Sp7g37060 PTHR11071//PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED ch7-6 + View
Schrenkiella parvula Sp4g00280 PTHR11071//PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED ch4-1 - View
Solanum pennellii Sopen10g024850 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle), Encodes cytosolic cyclophilin ROC3. | rotamase CYP 3 (ROC3) | FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity | INVOLVED IN: protein folding, signal transduction | LOCATED IN: cytosol, chloroplast, plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Spenn-ch10 + View
Solanum pennellii Sopen01g053230 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle), Encodes cytosolic cyclophilin ROC3. | rotamase CYP 3 (ROC3) | FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity | INVOLVED IN: protein folding, signal transduction | LOCATED IN: cytosol, chloroplast, plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400004440 Gene of unknown function ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400001630 Peptidyl-prolyl cis-trans isomerase ST4.03ch01 + View
Selenicereus undatus Hund06407 Scaffold_33676 + View
Trochodendron aralioides TAR376G0466 group14 + View
Theobroma cacao Thecc.02G066500 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104807794 peptidyl-prolyl cis-trans isomerase CYP18-3 NW_010963495.1 - View
Tripterygium wilfordii TWI31G0975 NC_052233.1 - View
Vaccinium macrocarpon vmacro17376 Similar to PCKR1: Peptidyl-prolyl cis-trans isomerase (Catharanthus roseus OX%3D4058) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1353 CM024072.1 + View