Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold63G21652 scaffold63 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G8290 LG-7 - View
Aethionema arabicum Aa31LG4G11130 LG-4 - View
Acer truncatum Atru.chr11.1790 chr11 + View
Actinidia chinensis Actinidia31208 Lachesis_group12 + View
Arabidopsis lyrata AL1G38760 scaffold_1 - View
Arabidopsis lyrata AL2G28770 scaffold_2 + View
Avicennia marina MSTRG.7802 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.697 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.2344 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.23942 ScioBoG_3895_HRSCAF_3912 + View
Avicennia marina MSTRG.13421 ScioBoG_18778_HRSCAF_18863 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G5EV1M PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B27XR5 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G26880 Ribosomal protein L34e superfamily protein Ribosomal protein L34e superfamily protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C nucleolus%2C chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e%2C conserved site (InterPro:IPR018065)%2C Ribosomal protein L34e (InterPro:IPR008195)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1)%3B Has 959 Blast hits to 959 proteins in 320 species: Archae - 70%3B Bacteria - 0%3B Metazoa - 301%3B Fungi - 143%3B Plants - 198%3B Viruses - 0%3B Other Eukaryotes - 247 (source: NCBI BLink). Ribosomal protein L34e superfamily protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e%2C conserved site (InterPro:IPR018065)%2C Ribosomal protein L34e (InterPro:IPR008195)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1)%3B Has 937 Blast hits to 937 proteins in 311 species: Archae - 67%3B Bacteria - 0%3B Metazoa - 288%3B Fungi - 137%3B Plants - 198%3B Viruses - 0%3B Other Eukaryotes - 247 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G69610 zinc finger FYVE domain protein, putative (DUF1666) FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: N-terminal protein myristoylation%2C translation%3B LOCATED IN: ribosome%2C intracellular%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195)%2C Protein of unknown function DUF1666 (InterPro:IPR012870)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT5G39785.1)%3B Has 289 Blast hits to 276 proteins in 65 species: Archae - 3%3B Bacteria - 18%3B Metazoa - 43%3B Fungi - 27%3B Plants - 92%3B Viruses - 0%3B Other Eukaryotes - 106 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0564G172 AmTr_v1.0_scaffold00010 - View
Brassica carinata BcaC08g46406 ChrC08 + View
Brassica carinata BcaB03g14734 ChrB03 + View
Brassica carinata BcaC03g15100 ChrC03 + View
Brassica carinata BcaB04g19488 ChrB04 - View
Brassica napus A07p35990 A07 + View
Brassica napus A09p03840 A09 - View
Brassica oleracea BolC6t39416H C6 + View
Brassica rapa BraA02t06661Z A02 + View
Brassica rapa BraA09t36021Z A09 - View
Beta vulgaris EL10Ac6g13203 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Chr6_EL10_PGA_scaffold0 - View
Corylus avellana Haze_12014 Similar to RPL34: 60S ribosomal protein L34 (Pisum sativum OX%3D3888) 9 + View
Corylus avellana Haze_14540 Protein of unknown function 5 + View
Coffea canephora Cc11_g13020 Putative uncharacterized protein chr11 + View
Coffea canephora Cc07_g03330 60S ribosomal protein L34 chr7 - View
Citrus clementina Ciclev10033093m.g scaffold_4 - View
Carpinus fangiana Cfa008984 Cfa03 + View
Cardamine hirsuta CARHR025100 60S ribosomal protein L34, putative Chr1 - View
Cardamine hirsuta CARHR151920 60S ribosomal protein L34, putative Chr5 - View
Cardamine hirsuta CARHR062560 Protein of unknown function (DUF1666) Chr2 + View
Carya illinoinensis CiPaw.06G084700 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Chr06 - View
Carya illinoinensis CiPaw.03G027300 PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Chr03 + View
Carya illinoinensis CiPaw.05G135500 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Chr05 + View
Citrullus lanatus ClCG09G018270 60S ribosomal protein L34, putative CG_Chr09 - View
Citrullus lanatus ClCG05G024300 60S ribosomal protein L34, putative CG_Chr05 + View
Cucumis melo MELO3C021986.2 Ribosomal protein L34Ae chr09 + View
Cucumis melo MELO3C012093.2 Ribosomal protein L34Ae chr10 + View
Chenopodium quinoa AUR62028774 Protein of unknown function C_Quinoa_Scaffold_2837 + View
Capsella rubella Carub.0001s2414 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) scaffold_1 - View
Capsella rubella Carub.0005s0744 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) scaffold_5 - View
Capsella rubella Carub.0002s1628 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED scaffold_2 + View
Cucumis sativus L. CsaV3_5G032660 Ribosomal protein L34Ae chr5 - View
Davidia involucrata Dinv11530 GWHABJS00000012 + View
Davidia involucrata Dinv34156 GWHABJS00000008 + View
Davidia involucrata Dinv16643 GWHABJS00000018 - View
Durio zibethinus Duzib147G0795 NW_019168470.1 - View
Durio zibethinus Duzib268G1505 NW_019168270.1 + View
Durio zibethinus Duzib187G1332 NW_019167860.1 - View
Durio zibethinus Duzib251G0238 NW_019167971.1 + View
Durio zibethinus Duzib248G0254 NW_019168048.1 - View
Erigeron canadensis ECA234G2043 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.B03443 Chr02 + View
Erythranthe guttata Migut.H00919 scaffold_8 - View
Erythranthe guttata Migut.E00093 scaffold_5 + View
Eutrema salsugineum Thhalv10009127m.g K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) scaffold_5 - View
Eutrema salsugineum Thhalv10019324m.g K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) scaffold_9 - View
Fragaria x ananassa FAN08G2996 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Fvb5-3 - View
Fragaria x ananassa FAN17G0802 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Fvb4-2 - View
Fragaria x ananassa FAN22G2392 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Fvb4-1 - View
Fragaria x ananassa FAN12G2200 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Fvb4-3 - View
Fragaria x ananassa FAN07G1216 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Fvb4-4 - View
Fragaria vesca FvH4_4g31360 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Fvb4 - View
Fragaria vesca FvH4_6g48640 PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D09G015300 PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED D09 + View
Gossypium hirsutum Gohir.A12G165200 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) A12 + View
Gossypium hirsutum Gohir.A03G100800 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED A03 - View
Gossypium hirsutum Gohir.A09G016700 PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED A09 + View
Gossypium hirsutum Gohir.A13G074500 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED A13 - View
Gossypium hirsutum Gohir.D02G125600 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED D02 - View
Gossypium hirsutum Gohir.A05G365500 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) A05 - View
Gossypium hirsutum Gohir.D04G049300 PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED D04 + View
Gossypium hirsutum Gohir.D13G074700 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED D13 - View
Glycine max Glyma.02G107100 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Gm02 - View
Glycine max Glyma.20G036600 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Gm20 + View
Glycine max Glyma.01G047000 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Gm01 - View
Glycine max Glyma.07G230300 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Gm07 + View
Gossypium raimondii Gorai.012G054600 Chr12 + View
Gossypium raimondii Gorai.013G085400 Chr13 - View
Gossypium raimondii Gorai.006G017500 Chr06 + View
Gossypium raimondii Gorai.005G141300 Chr05 - View
Helianthus annuus HanXRQChr17g0570771 Probable ribosomal protein L34 HanXRQChr17 - View
Lupinus albus Lalb_Chr04g0256061 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Lalb_Chr04 + View
Lupinus albus Lalb_Chr05g0220361 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Lalb_Chr05 + View
Lupinus albus Lalb_Chr09g0329281 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Lalb_Chr09 + View
Lotus japonicus Lj2g0015030 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) chr2 - View
Lotus japonicus Lj1g0001270 PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED chr1 + View
Lonicera japonica Lju41A18G45 GWHAAZE00000094 + View
Lonicera japonica Lj6A788G60 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_8_52301 Lsat_1_v8_lg_8 + View
Malus domestica MD16G1072900 Protein of unknown function (DUF1666) Chr16 - View
Malus domestica MD09G1050600 Ribosomal protein L34e superfamily protein Chr09 - View
Malus domestica MD13G1072400 Ribosomal protein L34e superfamily protein Chr13 + View
Manihot esculenta Manes.05G101100 Chromosome05 - View
Manihot esculenta Manes.01G090400 Chromosome01 - View
Olea europaea Oeu055119.1 chr11 + View
Oryza sativa ssp. japonica Os08g0436800 Similar to 60S ribosomal protein L34. chr08 - View
Punica granatum PGR102G2004 NC_045129.1 - View
Prunus persica Prupe.1G274500 K02915 - large subunit ribosomal protein L34e (RP-L34e, RPL34) Pp01 - View
Prunus persica Prupe.3G268100 PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Pp03 + View
Papaver somniferum PSO478G3378 NC_039361.1 + View
Quercus lobata QL03p063368 3 - View
Quercus lobata QL03p064089 3 + View
Quercus lobata QL02p081740 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr4g0439871 RcHm_v2.0_Chr4 - View
Salvia bowleyana SalBow8G1418 GWHASIU00000004 - View
Salix brachista Sabra17G0073100 GWHAAZH00000017 - View
Simmondsia chinensis Sc11g0001920 GWHAASQ00000011 - View
Simmondsia chinensis Sc04g0008130 GWHAASQ00000004 + View
Sechium edule Sed0008523 LG06 + View
Solanum lycopersicum Solyc05g007560.3 60S ribosomal protein L34 (AHRD V3.3 *** A0A1U8HB42_CAPAN) SL4.0ch05 - View
Schrenkiella parvula Sp5g24730 PTHR10759//PTHR10759:SF9 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED ch5-6 + View
Solanum pennellii Sopen05g003450 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco), Ribosomal protein L34e superfamily protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, ribosome biogenesis | LOCATED IN: ribosome | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site , Ribosomal protein L34e | BEST Arabidopsis thaliana protein match is: ribosomal protein L34 Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400031257 60S ribosomal protein L34 ST4.03ch05 + View
Selenicereus undatus Hund25236 Scaffold_3410 + View
Selenicereus undatus Hund05881 Scaffold_19641 + View
Trochodendron aralioides TAR629G0761 group0 + View
Trochodendron aralioides TAR371G0539 group13 - View
Theobroma cacao Thecc.02G346600 Uncharacterized protein Chromosome_2 + View
Theobroma cacao Thecc.04G081100 Ribosomal protein L34e superfamily protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104805158 60S ribosomal protein L34-like NW_010961290.1 - View
Tarenaya hassleriana THA.LOC104822913 uncharacterized protein LOC104822913 NW_010966822.1 + View
Utricularia gibba unitig_22.g5549 unitig_22 - View
Vitis vinifera GSVIVG01019985001 chr1 - View