Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold51G18754 scaffold51 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G14710 LG-7 - View
Aethionema arabicum Aa31LG6G15670 LG-6 - View
Arabidopsis lyrata AL7G11580 scaffold_7 + View
Arabidopsis lyrata AL4G11260 scaffold_4 + View
Avicennia marina MSTRG.2530 ScioBoG_102835_HRSCAF_103059 + View
Aquilegia oxysepala Aqoxy6G00470 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WB0Z4U 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JNA5NA 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A4G237 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.91QE12 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT4G39540 shikimate kinase 2 Encodes a shikimate kinase. Its transcripts appear to be expressed in vegetative tissues and developing embryos. SK2 transcript levels rise in response to Phytophthora infestans spores. SK2 is believed to be localized to the chloroplast. shikimate kinase 2 (SK2)%3B FUNCTIONS IN: shikimate kinase activity%2C ATP binding%3B INVOLVED IN: aromatic amino acid family biosynthetic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623)%3B BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5)%3B Has 7816 Blast hits to 7816 proteins in 2412 species: Archae - 26%3B Bacteria - 5492%3B Metazoa - 45%3B Fungi - 121%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 1970 (source: NCBI BLink). shikimate kinase 2 (SK2)%3B FUNCTIONS IN: shikimate kinase activity%2C ATP binding%3B INVOLVED IN: aromatic amino acid family biosynthetic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623)%3B BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5). Chr4 + View
Arabidopsis thaliana AT2G21940 shikimate kinase 1 Encodes a shikimate kinase. Its transcripts appear to be expressed most highly in mature embryos and senescing leaves%2C and its transcript levels rise during heat stress and recovery. It is believed to be localized to the chloroplast. shikimate kinase 1 (SK1)%3B FUNCTIONS IN: shikimate kinase activity%2C ATP binding%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623)%3B BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2)%3B Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26%3B Bacteria - 5482%3B Metazoa - 44%3B Fungi - 134%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 1983 (source: NCBI BLink). Chr2 + View
Brassica napus A01p00410 A01 + View
Brassica napus C01p00580 C01 + View
Brassica oleracea BolC1t00059H C1 + View
Brassica rapa BraA01t00050Z A01 + View
Cannabis sativa CANSAT01G1563 NC_044373.1 + View
Cicer arietinum L. Ca_17695_v3 Ca_LG6_v3 + View
Corylus avellana Haze_25044 Similar to SK: Shikimate kinase, chloroplastic (Solanum lycopersicum OX%3D4081) 8 - View
Coffea canephora Cc07_g16270 Shikimate kinase, chloroplastic chr7 - View
Citrus clementina Ciclev10026159m.g scaffold_7 + View
Carpinus fangiana Cfa002756 Cfa01 - View
Cardamine hirsuta CARHR113020 Shikimate kinase Chr4 + View
Cardamine hirsuta CARHR247190 Shikimate kinase family protein Chr7 - View
Carya illinoinensis CiPaw.03G134200 PTHR21087:SF8 - SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED Chr03 + View
Carya illinoinensis CiPaw.15G010500 2.7.1.71 - Shikimate kinase Chr15 - View
Citrullus lanatus ClCG01G016150 Shikimate kinase CG_Chr01 + View
Citrullus lanatus ClCG02G001040 Shikimate kinase CG_Chr02 + View
Cucumis melo MELO3C020958.2 Shikimate kinase chr11 + View
Cucumis melo MELO3C007485.2 shikimate kinase 1, chloroplastic chr08 + View
Chenopodium quinoa AUR62003305 SK: Shikimate kinase, chloroplastic C_Quinoa_Scaffold_1000 + View
Capsella rubella Carub.0007s0141 2.7.1.71 - Shikimate kinase scaffold_7 + View
Capsella rubella Carub.0004s0108 2.7.1.71 - Shikimate kinase scaffold_4 + View
Cucumis sativus L. CsaV3_6G042420 Shikimate kinase chr6 + View
Cucumis sativus L. CsaV3_2G017660 Shikimate kinase chr2 - View
Daucus carota DCAR_001370 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19485 GWHABJS00000014 - View
Davidia involucrata Dinv42694 GWHABJS00000021 - View
Davidia involucrata Dinv41011 GWHABJS00000002 + View
Durio zibethinus Duzib147G0681 NW_019168470.1 + View
Durio zibethinus Duzib264G0944 NW_019167960.1 + View
Eucalyptus grandis Eucgr.I00321 Chr09 + View
Erythranthe guttata Migut.H02438 scaffold_8 - View
Fragaria x ananassa FAN23G2242 2.7.1.71 - Shikimate kinase Fvb1-3 - View
Fragaria x ananassa FAN19G1247 2.7.1.71 - Shikimate kinase Fvb1-4 - View
Fragaria x ananassa FAN28G1652 K00891 - shikimate kinase (E2.7.1.71, aroK, aroL) Fvb1-1 - View
Fragaria x ananassa FAN26G2241 K00891 - shikimate kinase (E2.7.1.71, aroK, aroL) Fvb1-2 - View
Gossypium hirsutum Gohir.A11G198100 2.7.1.71 - Shikimate kinase A11 - View
Gossypium hirsutum Gohir.D11G233600 2.7.1.71 - Shikimate kinase D11 + View
Glycine max Glyma.04G219200 2.7.1.71 - Shikimate kinase Gm04 + View
Glycine max Glyma.08G141500 2.7.1.71 - Shikimate kinase Gm08 - View
Glycine max Glyma.05G183700 2.7.1.71 - Shikimate kinase Gm05 - View
Glycine max Glyma.06G146566 2.7.1.71 - Shikimate kinase Gm06 - View
Gossypium raimondii Gorai.007G244500 Chr07 - View
Lupinus albus Lalb_Chr13g0296211 2.7.1.71 - Shikimate kinase Lalb_Chr13 - View
Lupinus albus Lalb_Chr12g0203521 2.7.1.71 - Shikimate kinase Lalb_Chr12 + View
Lotus japonicus Lj1g0011600 2.7.1.71 - Shikimate kinase chr1 + View
Lotus japonicus Lj4g0006731 2.7.1.71 - Shikimate kinase chr4 + View
Lonicera japonica Lj4C866G0 GWHAAZE00000004 + View
Magnolia biondii MBI05_g00332_MAGBIO AED:0.16 Chr05 + View
Magnolia biondii MBI02_g18924_MAGBIO AED:0.07 Chr02 + View
Malus domestica MD15G1332900 shikimate kinase 1 Chr15 + View
Manihot esculenta Manes.13G076034 Chromosome13 + View
Manihot esculenta Manes.12G142800 Chromosome12 - View
Nelumbo nucifera Nn5g28902 chr5 + View
Olea europaea Oeu028369.1 chr18 - View
Prunus persica Prupe.6G172800 Pp06 + View
Papaver somniferum PSO170G0472 NC_039360.1 + View
Populus trichocarpa Potri.005G084600 2.7.1.71 - Shikimate kinase Chr05 - View
Populus trichocarpa Potri.007G081000 2.7.1.71 - Shikimate kinase Chr07 + View
Phaseolus vulgaris Phvul.002G264800 PTHR21087:SF8 - SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED Chr02 - View
Quercus lobata QL06p032113 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0116491 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim10G0150100 chr10 + View
Rhododendron simsii Rhsim11G0089700 chr11 + View
Salvia bowleyana SalBow6G0726 GWHASIU00000002 - View
Salix brachista Sabra07G0068000 GWHAAZH00000007 + View
Salix brachista Sabra05G0069700 GWHAAZH00000005 - View
Solanum lycopersicum Solyc04g051860.3 shikimate kinase precursor SL4.0ch04 + View
Schrenkiella parvula Sp4g01020 2.7.1.71 - Shikimate kinase ch4-1 + View
Schrenkiella parvula Sp7g36340 2.7.1.71 - Shikimate kinase ch7-6 - View
Solanum pennellii Sopen04g023190 shikimate kinase 1 (SK1) | FUNCTIONS IN: shikimate kinase activity, ATP binding | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Shikimate kinase | BEST Arabidopsis thaliana protein match is: shikimate kinase 2 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400016553 Shikimate kinase, chloroplastic ST4.03ch04 - View
Selenicereus undatus Hund19655 Scaffold_33673 + View
Trochodendron aralioides TAR381G1363 group11 - View
Theobroma cacao Thecc.01G113000 Shikimate kinase Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807723 shikimate kinase 1%2C chloroplastic-like NW_010963495.1 - View
Trifolium pratense TPR.G2181 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI53G1219 NC_052244.1 - View
Utricularia gibba unitig_899.g14607 unitig_899 - View
Vaccinium macrocarpon vmacro23034 Similar to SK1: Shikimate kinase 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0649 CM024072.1 - View
Vigna mungo VMungo0251G3029 CM024069.1 - View
Vitis vinifera GSVIVG01022229001 chr7 - View