Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold138G35315 scaffold138 + View
SGA_v2.0_scaffold191G40482 scaffold191 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G17100 LG-10 - View
Aethionema arabicum Aa31LG8G9230 LG-8 - View
Acer truncatum Atru.chr5.1490 chr5 - View
Acer truncatum Atru.chr4.2389 chr4 + View
Actinidia chinensis Actinidia24916 Lachesis_group15 + View
Actinidia chinensis Actinidia21135 Lachesis_group9 + View
Actinidia chinensis Actinidia08478 Lachesis_group18 + View
Arabidopsis lyrata AL3G37050 scaffold_3 - View
Arabidopsis lyrata AL5G46100 scaffold_5 - View
Avicennia marina MSTRG.21544 ScioBoG_26769_HRSCAF_26899 + View
Avicennia marina MSTRG.9965 ScioBoG_12795_HRSCAF_12848 + View
Amaranthus hybridus Ah.11g050360 Selenocysteine methyltransferase (SECYS-MT) (SECYS-methyltransferase) (EC 2.1.1.280) AmaHy_arrow1_Scaffold_11 + View
Aquilegia oxysepala Aqoxy5G00424 CHR05 + View
Aquilegia oxysepala Aqoxy2G03438 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EXF4LS K00547 - homocysteine S-methyltransferase (mmuM) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2XQ2YI 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8L0DUY 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RX7YKY 2.1.1.10 - Homocysteine S-methyltransferase arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT3G22740 homocysteine S-methyltransferase 3 homocysteine S-methyltransferase (HMT3) homocysteine S-methyltransferase 3 (HMT3)%3B FUNCTIONS IN: homocysteine S-methyltransferase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726)%3B BEST Arabidopsis thaliana protein match is: homocysteine methyltransferase 2 (TAIR:AT3G63250.1)%3B Has 6696 Blast hits to 6688 proteins in 1870 species: Archae - 4%3B Bacteria - 4184%3B Metazoa - 339%3B Fungi - 135%3B Plants - 163%3B Viruses - 0%3B Other Eukaryotes - 1871 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT3G63250 homocysteine methyltransferase 2 Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome%2C HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However%2C HMT2 does not significantly contribute to the total HMT activity in seeds. homocysteine methyltransferase 2 (HMT2)%3B CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726)%3B BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1)%3B Has 6768 Blast hits to 6760 proteins in 1892 species: Archae - 4%3B Bacteria - 4264%3B Metazoa - 340%3B Fungi - 135%3B Plants - 163%3B Viruses - 0%3B Other Eukaryotes - 1862 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0665G350 AmTr_v1.0_scaffold00002 + View
Brassica carinata BcaB06g26382 ChrB06 - View
Brassica carinata BcaC05g28026 ChrC05 + View
Brassica carinata BcaB02g08074 ChrB02 + View
Brassica napus C04p29960 C04 + View
Brassica napus C08p37950 C08 - View
Brassica napus A05p26000 A05 + View
Brassica napus C05p40390 C05 + View
Brassica oleracea BolC5t32780H C5 + View
Brassica rapa BraA05t21485Z A05 + View
Beta vulgaris EL10Ac5g10523 2.1.1.280 - Selenocysteine Se-methyltransferase Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0004386 selenocysteine methyltransferase [Camellia sinensis] Contig1123 + View
Camellia sinensis var. sinensis CSS0045268 selenocysteine methyltransferase [Camellia sinensis] Contig240 + View
Camellia sinensis var. sinensis CSS0050363 PREDICTED: homocysteine S-methyltransferase 2-like [Nicotiana sylvestris] Chr9 - View
Cannabis sativa CANSAT25G1683 NC_044370.1 - View
Cannabis sativa CANSAT78G0673 NC_044376.1 - View
Cicer arietinum L. Ca_10863_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_08618_v3 Ca_LG3_v3 - View
Corylus avellana Haze_04669 Similar to HMT-2: Homocysteine S-methyltransferase 2 (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_11212 Similar to HMT3: Homocysteine S-methyltransferase 3 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g04100 Homocysteine S-methyltransferase 3 chr3 - View
Coffea canephora Cc01_g19150 Homocysteine S-methyltransferase 2 chr1 + View
Citrus clementina Ciclev10020605m.g scaffold_3 + View
Citrus clementina Ciclev10005328m.g scaffold_9 - View
Ceratophyllum demersum CDE07G0935 5 + View
Ceratophyllum demersum CDE06G0195 4 - View
Carpinus fangiana Cfa006178 Cfa02 - View
Carpinus fangiana Cfa008461 Cfa03 + View
Cardamine hirsuta CARHR098590 Homocysteine S-methyltransferase 3 Chr3 - View
Cardamine hirsuta CARHR291700 homocysteine methyltransferase 2 NSCAFB.271 + View
Carya illinoinensis CiPaw.01G197500 2.1.1.10 - Homocysteine S-methyltransferase Chr01 + View
Carya illinoinensis CiPaw.02G122600 2.1.1.10 - Homocysteine S-methyltransferase Chr02 + View
Citrullus lanatus ClCG06G006370 Homocysteine S-methyltransferase 3 family protein CG_Chr06 + View
Citrullus lanatus ClCG09G007300 homocysteine methyltransferase 2 LENGTH=333 CG_Chr09 - View
Cucumis melo MELO3C015794.2 homocysteine S-methyltransferase 2 chr01 - View
Carica papaya Cpa.g.sc58.63 supercontig_58 + View
Chenopodium quinoa AUR62011991 HMT-2: Homocysteine S-methyltransferase 2 C_Quinoa_Scaffold_2008 + View
Chenopodium quinoa AUR62032310 HMT-2: Homocysteine S-methyltransferase 2 C_Quinoa_Scaffold_1762 + View
Capsella rubella Carub.0005s2993 PTHR21091//PTHR21091:SF6 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // HOMOCYSTEINE S-METHYLTRANSFERASE 2 scaffold_5 - View
Capsella rubella Carub.0003s2287 PTHR21091//PTHR21091:SF114 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // HOMOCYSTEINE S-METHYLTRANSFERASE 3 scaffold_3 - View
Cucumis sativus L. CsaV3_2G013530 Homocysteine S-methyltransferase chr2 - View
Cucumis sativus L. CsaV3_7G027790 Homocysteine S-methyltransferase chr7 - View
Daucus carota DCAR_030677 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_002712 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv34784 GWHABJS00000007 - View
Davidia involucrata Dinv32899 GWHABJS00000010 + View
Davidia involucrata Dinv44565 GWHABJS00000014 - View
Durio zibethinus Duzib052G0762 NW_019167849.1 - View
Durio zibethinus Duzib211G0436 NW_019168049.1 - View
Erigeron canadensis ECA247G3416 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G1983 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.H03427 Chr08 + View
Erythranthe guttata Migut.D00332 scaffold_4 - View
Erythranthe guttata Migut.G00367 scaffold_7 - View
Eutrema salsugineum Thhalv10006074m.g PTHR21091:SF6 - HOMOCYSTEINE S-METHYLTRANSFERASE 2 scaffold_19 + View
Eutrema salsugineum Thhalv10021051m.g K00547 - homocysteine S-methyltransferase (mmuM) scaffold_13 + View
Fragaria x ananassa FAN12G1465 K00547 - homocysteine S-methyltransferase (mmuM) Fvb4-3 + View
Fragaria x ananassa FAN24G0229 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase Fvb2-2 - View
Fragaria x ananassa FAN15G0114 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase Fvb2-4 + View
Fragaria vesca FvH4_2g23130 2.1.1.280 - Selenocysteine Se-methyltransferase Fvb2 + View
Gossypium hirsutum Gohir.D02G040200 PTHR21091//PTHR21091:SF114 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // HOMOCYSTEINE S-METHYLTRANSFERASE 3 D02 - View
Gossypium hirsutum Gohir.A08G065100 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase A08 + View
Gossypium hirsutum Gohir.A02G033600 PTHR21091//PTHR21091:SF114 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // HOMOCYSTEINE S-METHYLTRANSFERASE 3 A02 - View
Gossypium hirsutum Gohir.D08G073600 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase D08 + View
Glycine max Glyma.19G158800 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase Gm19 - View
Glycine max Glyma.03G156500 2.1.1.280 - Selenocysteine Se-methyltransferase Gm03 - View
Gossypium raimondii Gorai.005G044600 Chr05 - View
Helianthus annuus HanXRQChr10g0282261 Probable homocysteine methyltransferase 2 HanXRQChr10 - View
Hydrangea macrophylla Hma1.2p1_1572F.1_g291510 Hma1.2p1_1572F.1 - View
Lotus japonicus Lj5g0013491 K00547 - homocysteine S-methyltransferase (mmuM) chr5 - View
Lotus japonicus Lj1g0000088 2.1.1.280 - Selenocysteine Se-methyltransferase chr1 + View
Lonicera japonica Lj3C730T4 GWHAAZE00000003 + View
Lonicera japonica Lj1C49G14 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_6080 Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_5_186100 Lsat_1_v8_lg_5 + View
Malus domestica MD03G1260400 homocysteine methyltransferase 2 Chr03 + View
Malus domestica MD11G1280700 homocysteine methyltransferase 2 Chr11 + View
Manihot esculenta Manes.15G031300 Chromosome15 - View
Manihot esculenta Manes.05G078500 Chromosome05 + View
Manihot esculenta Manes.01G205100 Chromosome01 + View
Medicago truncatula Medtr1g103290 homocysteine S-methyltransferase-like protein chr1 + View
Medicago truncatula Medtr7g095280 homocysteine S-methyltransferase-like protein chr7 - View
Nelumbo nucifera Nn1g02391 chr1 - View
Nelumbo nucifera Nn6g34130 chr6 - View
Nicotiana tabacum Nitab4.5_0000252g0130 Homocysteine S-methyltransferase Nitab4.5_0000252 - View
Olea europaea Oeu023619.1 chr16 - View
Oryza sativa ssp. japonica Os10g0422200 Similar to Homocysteine S-methyltransferase 3 (EC 2.1.1.10) (S- methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S- methyltransferase 3) (ZmHMT-3). chr10 + View
Petunia axillaris Peaxi162Scf00230g01011 homocysteine methyltransferase 2 Peaxi162Scf00230 + View
Petunia axillaris Peaxi162Scf00092g00025 homocysteine S-methyltransferase 3 Peaxi162Scf00092 + View
Punica granatum PGR119G2068 NC_045132.1 + View
Punica granatum PGR004G1463 NC_045131.1 - View
Prunus persica Prupe.1G018900 Pp01 - View
Prunus persica Prupe.8G236600 K00547 - homocysteine S-methyltransferase (mmuM) Pp08 + View
Pisum sativum Psat3g062800 Homocysteine S-methyltransferase chr3LG5 + View
Papaver somniferum PSO210G6804 NC_039359.1 - View
Populus trichocarpa Potri.002G049800 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase Chr02 + View
Populus trichocarpa Potri.008G155900 2.1.1.10 - Homocysteine S-methyltransferase Chr08 - View
Populus trichocarpa Potri.005G213100 2.1.1.10//2.1.1.280 - Homocysteine S-methyltransferase // Selenocysteine Se-methyltransferase Chr05 - View
Populus trichocarpa Potri.010G083600 2.1.1.10 - Homocysteine S-methyltransferase Chr10 + View
Phaseolus vulgaris Phvul.001G153900 PTHR21091:SF6 - HOMOCYSTEINE S-METHYLTRANSFERASE 2 Chr01 - View
Quercus lobata QL12p020734 12 + View
Quercus lobata QL06p001553 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0290381 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim02G0027800 chr02 - View
Rhododendron simsii Rhsim01G0272800 chr01 + View
Salvia bowleyana SalBow4G0978 GWHASIU00000008 + View
Salvia bowleyana SalBow2G2364 GWHASIU00000007 + View
Salix brachista Sabra05G0162800 GWHAAZH00000005 - View
Salix brachista Sabra10G0059400 GWHAAZH00000010 - View
Salix brachista Sabra02G0040700 GWHAAZH00000002 + View
Salix brachista Sabra08G0118700 GWHAAZH00000008 - View
Sechium edule Sed0003582 LG09 - View
Sechium edule Sed0018164 LG04 + View
Sechium edule Sed0027428 LG07 - View
Solanum lycopersicum Solyc09g065520.4 Homocysteine S-methyltransferase (AHRD V3.3 *** A0A200QYH8_9MAGN) SL4.0ch09 - View
Solanum lycopersicum Solyc09g082460.3 Homocysteine S-methyltransferase (AHRD V3.3 *** A0A200QYH8_9MAGN) SL4.0ch09 - View
Schrenkiella parvula Sp5g00280 PTHR21091:SF6 - HOMOCYSTEINE S-METHYLTRANSFERASE 2 ch5-1 + View
Schrenkiella parvula Sp3g20460 2.1.1.10 - Homocysteine S-methyltransferase ch3-1 - View
Solanum pennellii Sopen09g027280 Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | homocysteine methyltransferase 2 (HMT2) | FUNCTIONS IN: homocysteine S-methyltransferase activity | INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle | LOCATED IN: endomembrane system | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase | BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 Spenn-ch09 - View
Solanum pennellii Sopen09g031320 homocysteine S-methyltransferase (HMT3) | homocysteine S-methyltransferase 3 (HMT3) | FUNCTIONS IN: homocysteine S-methyltransferase activity | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase | BEST Arabidopsis thaliana protein match is: homocysteine methyltransferase 2 Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400032243 Homocysteine s-methyltransferase ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400019316 Homocysteine s-methyltransferase ST4.03ch09 - View
Selenicereus undatus Hund09519 Scaffold_10417 - View
Trochodendron aralioides TAR633G0813 group2 + View
Trochodendron aralioides TAR362G0185 group17 - View
Trochodendron aralioides TAR365G0541 group16 + View
Theobroma cacao Thecc.01G273600 Homocysteine methyltransferase 2 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104808566 homocysteine S-methyltransferase 3 NW_010964923.1 - View
Tarenaya hassleriana THA.LOC104823038 homocysteine S-methyltransferase 2 NW_010966822.1 + View
Trifolium pratense TPR.G26124 Tp57577_TGAC_v2_scaf_153 - View
Tripterygium wilfordii TWI75G1394 NC_052253.1 + View
Tripterygium wilfordii TWI12G1235 NC_052243.1 - View
Utricularia gibba unitig_22.g5268 unitig_22 - View
Vaccinium macrocarpon vmacro14905 Similar to HMT-2: Homocysteine S-methyltransferase 2 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro15361 Similar to HMT-2: Homocysteine S-methyltransferase 2 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G2322 CM024070.1 - View
Vanilla planifolia HPP92_020353 Homocysteine s-methyltransferase *** CM028159.1 + View
Vitis vinifera GSVIVG01018019001 chr5 - View
Vitis vinifera GSVIVG01001192001 chr7 + View