Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13200 LG-8 + View
Acer truncatum Atru.chr5.2594 chr5 + View
Actinidia chinensis Actinidia27966 Lachesis_group16 + View
Arabidopsis lyrata AL3G47140 scaffold_3 + View
Avicennia marina MSTRG.27740 ScioBoG_94932_HRSCAF_95134 - View
Arabidopsis thaliana AT2G15400 DNA-directed RNA polymerase family protein Non-catalytic subunit of Nuclear DNA-dependent RNA polymerase V%3B homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog%2C At2g15430 can substitute for At2g15400 in the context of Pol V and encodes the equivalent subunit of Pol II and Pol IV. NRPE3B%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C protein dimerization activity%2C DNA binding%3B INVOLVED IN: transcription%3B LOCATED IN: DNA-directed RNA polymerase V complex%2C DNA-directed RNA polymerase II%2C core complex%3B CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase%2C insert domain (InterPro:IPR011262)%2C DNA-directed RNA polymerase%2C dimerisation (InterPro:IPR011261)%2C DNA-directed RNA polymerase%2C RpoA/D/Rpb3-type (InterPro:IPR011263)%2C DNA-directed RNA polymerase%2C 30-40kDa subunit%2C conserved site (InterPro:IPR001514)%2C DNA-directed RNA polymerase%2C RBP11-like (InterPro:IPR009025)%3B BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT2G15430.1)%3B Has 1357 Blast hits to 1356 proteins in 354 species: Archae - 243%3B Bacteria - 1%3B Metazoa - 278%3B Fungi - 347%3B Plants - 109%3B Viruses - 0%3B Other Eukaryotes - 379 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC06g36057 ChrC06 + View
Brassica napus C07p08390 C07 - View
Brassica napus A07p05280 A07 - View
Brassica rapa BraA07t28320Z A07 - View
Camellia sinensis var. sinensis CSS0022988 DNA-directed RNA polymerase family protein [Theobroma cacao] Chr3 - View
Corylus avellana Haze_10156 Similar to NRPB3: DNA-directed RNA polymerases II, IV and V subunit 3 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc02_g19130 DNA-directed RNA polymerase II subunit RPB3-A chr2 - View
Citrus clementina Ciclev10028849m.g scaffold_8 + View
Carpinus fangiana Cfa004562 Cfa02 - View
Chenopodium quinoa AUR62010272 NRPB3: DNA-directed RNA polymerases II, IV and V subunit 3 C_Quinoa_Scaffold_1257 - View
Capsella rubella Carub.0003s2927 K03011 - DNA-directed RNA polymerase II subunit RPB3 (RPB3, POLR2C) scaffold_3 + View
Daucus carota DCAR_021998 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv42183 GWHABJS00000002 + View
Durio zibethinus Duzib248G1300 NW_019168048.1 + View
Erythranthe guttata Migut.N01173 scaffold_14 + View
Fragaria x ananassa FAN15G0415 KOG1522 - RNA polymerase II, subunit POLR2C/RPB3 Fvb2-4 + View
Fragaria x ananassa FAN24G2661 K03011 - DNA-directed RNA polymerase II subunit RPB3 (RPB3, POLR2C) Fvb2-2 - View
Gossypium hirsutum Gohir.D12G023000 K03011 - DNA-directed RNA polymerase II subunit RPB3 (RPB3, POLR2C) D12 + View
Gossypium hirsutum Gohir.A12G022600 K03011 - DNA-directed RNA polymerase II subunit RPB3 (RPB3, POLR2C) A12 + View
Gossypium raimondii Gorai.008G023500 Chr08 + View
Lonicera japonica Lj5C213T4 GWHAAZE00000005 - View
Malus domestica MD10G1096200 DNA-directed RNA polymerase family protein Chr10 - View
Papaver somniferum PSO675G0875 NC_039358.1 - View
Papaver somniferum PSO541G0439 NC_039363.1 - View
Populus trichocarpa Potri.009G097600 K03011 - DNA-directed RNA polymerase II subunit RPB3 (RPB3, POLR2C) Chr09 + View
Quercus lobata QL11p034241 11 + View
Rhododendron simsii Rhsim11G0160900 chr11 + View
Rhododendron simsii Rhsim05G0087400 chr05 - View
Salvia bowleyana SalBow3G0479 GWHASIU00000006 - View
Salix brachista Sabra09G0074900 GWHAAZH00000009 + View
Theobroma cacao Thecc.02G106100 DNA-directed RNA polymerase family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104804386 DNA-directed RNA polymerases II%2C IV and V subunit 3 NW_010971389.1 - View
Tripterygium wilfordii TWI79G1683 NC_052238.1 + View
Tripterygium wilfordii TWI31G0147 NC_052233.1 + View
Utricularia gibba unitig_26.g10235 unitig_26 + View
Vaccinium macrocarpon vmacro02010 Similar to NRPB3: DNA-directed RNA polymerases II, IV and V subunit 3 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01003174001 chr3 - View