Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold4G02135 scaffold4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G1640 LG-10 + View
Actinidia chinensis Actinidia12839 Lachesis_group19 - View
Actinidia chinensis Actinidia35178 Lachesis_group2 - View
Avicennia marina MSTRG.14274 ScioBoG_18782_HRSCAF_18867 + View
Avicennia marina MSTRG.15007 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.04g163800 Polyadenylate-binding protein-interacting protein 9 (PABP-interacting protein 9) (Poly(A)-binding protein-interacting protein 9) (PAM2-containing protein CID9) (Protein CTC-INTERACTING DOMAIN 9) AmaHy_arrow1_Scaffold_4 - View
Brassica carinata BcaB06g25380 ChrB06 - View
Cannabis sativa CANSAT56G1515 NC_044371.1 + View
Coffea canephora Cc05_g10230 CTC-interacting domain 9 chr5 + View
Carpinus fangiana Cfa019452 Cfa08 + View
Daucus carota DCAR_017565 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv26664 GWHABJS00000013 - View
Davidia involucrata Dinv13308 GWHABJS00000001 + View
Erigeron canadensis ECA236G4998 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.F03200 Chr06 + View
Erythranthe guttata Migut.H02073 scaffold_8 + View
Fragaria x ananassa FAN21G0920 PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Fvb3-2 - View
Gossypium hirsutum Gohir.D11G301400 PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) D11 - View
Gossypium raimondii Gorai.007G335300 Chr07 - View
Lupinus albus Lalb_Chr03g0031461 PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Lalb_Chr03 - View
Lupinus albus Lalb_Chr25g0285371 PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Lalb_Chr25 + View
Lupinus albus Lalb_Chr01g0016071 PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Lalb_Chr01 + View
Lupinus albus Lalb_Chr19g0133581 KOG0114//KOG0131 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 Lalb_Chr19 + View
Lotus japonicus Lj3g0001281 KOG0131//KOG0148 - Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) chr3 - View
Lactuca sativa Lsat_1_v5_gn_7_101481 Lsat_1_v8_lg_7 + View
Manihot esculenta Manes.15G102100 Chromosome15 - View
Petunia axillaris Peaxi162Scf00111g00821 CTC-interacting domain 9 Peaxi162Scf00111 + View
Rhododendron simsii Rhsim06G0184600 chr06 + View
Solanum pennellii Sopen07g029940 RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain. | CTC-interacting domain 9 (CID9) | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Ataxin-2, C-terminal | BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400027650 Ctc-interacting domain 9 ST4.03ch07 + View
Tarenaya hassleriana THA.LOC104810411 polyadenylate-binding protein-interacting protein 9 NW_010965216.1 + View
Vaccinium macrocarpon vmacro12017 Similar to CID9: Polyadenylate-binding protein-interacting protein 9 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09433 Similar to CID9: Polyadenylate-binding protein-interacting protein 9 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View