Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
HanXRQChr10g0318091 Putative cytochrome b6/f complex, subunit IV HanXRQChr10 - View
HanXRQChr12g0369831 Putative cytochrome b6/f complex, subunit IV HanXRQChr12 + View
HanXRQChr00c0593g0576331 Putative cytochrome b/b6, C-terminal HanXRQChr00c0593 + View
HanXRQChr10g0284321 Putative photosystem antenna protein-like HanXRQChr10 + View
HanXRQChr04g0127521 Putative cytochrome b6/f complex, subunit IV; Di-haem cytochrome, transmembrane; Cytochrome b6, PetB; Cytochrome b/b6-like domain HanXRQChr04 - View
HanXRQChr11g0326911 Putative photosystem antenna protein-like HanXRQChr11 + View
HanXRQCPg0580121 Putative photosystem antenna protein-like HanXRQCP + View
HanXRQChr05g0152591 Putative cytochrome b/b6, C-terminal HanXRQChr05 - View
HanXRQChr01g0020251 Putative cytochrome b6/f complex, subunit IV HanXRQChr01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL2G21650 scaffold_2 + View
Arabidopsis lyrata AL2G20590 scaffold_2 - View
Amaranthus hybridus Ah.10g028950 AmaHy_arrow1_Scaffold_10 + View
Amaranthus hybridus Ah.10g027180 Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein CP-47) AmaHy_arrow1_Scaffold_10 + View
Arabidopsis thaliana ATCG00680 photosystem II reaction center protein B encodes for CP47%2C subunit of the photosystem II reaction center. photosystem II reaction center protein B (PSBB)%3B FUNCTIONS IN: chlorophyll binding%3B INVOLVED IN: photosynthesis%2C light reaction%2C photosystem II assembly%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932)%2C Photosystem II%2C PsbB (InterPro:IPR017486)%3B BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). ChrC + View
Brassica napus BNapus_Darmor_BZH_scaffold_253p00270 BNapus_Darmor_BZH_scaffold_253 + View
Brassica oleracea BolSC49t61166H Boleracea_scaffold_49 - View
Brassica oleracea BolSC35t60733H Boleracea_scaffold_35 - View
Brassica oleracea BolSC56t61249H Boleracea_scaffold_56 + View
Brassica oleracea BolSC47t61078H Boleracea_scaffold_47 - View
Brassica oleracea BolSC35t60661H Boleracea_scaffold_35 + View
Brassica oleracea BolC7t41712H C7 - View
Brassica oleracea BolSC29t60602H Boleracea_scaffold_29 + View
Brassica rapa BraSC143t45634Z Brapa_scaffold_143 + View
Brassica rapa BraSC138t45556Z Brapa_scaffold_138 - View
Brassica rapa BraSC58t46435Z Brapa_scaffold_58 + View
Brassica rapa BraSC103t45448Z Brapa_scaffold_103 - View
Brassica rapa BraA06t25376Z A06 + View
Cardamine hirsuta CARHR282190 Photosystem II CP47 chlorophyll apoprotein ChrC + View
Daucus carota DCAR_032511 photosystem II 47 kDa protein DCARv2_PT + View
Gossypium hirsutum Gohir.D01G102034 PF00421 - Photosystem II protein (PSII) D01 + View
Gossypium hirsutum Gohir.1Z078400 K02637 - cytochrome b6-f complex subunit 4 (petD) scaffold_747 - View
Lupinus albus Lalb_Chr23g0274181 PF00421 - Photosystem II protein (PSII) Lalb_Chr23 + View
Lotus japonicus LjContig00318g0016009 K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) Contig00318 + View
Lonicera japonica Lj2P1239T124 GWHAAZE00000002 - View
Medicago truncatula Medtr0002s0740 photosystem II CP47 chlorophyll A apoprotein scaffold0002 + View
Medicago truncatula Medtr4g051370 photosystem II CP47 chlorophyll A apoprotein chr4 + View
Nelumbo nucifera Nn021s41525 scaffold021 - View
Punica granatum PGR111G0071 NC_035240.1 + View
Papaver somniferum PSO548G0100 NC_029434.1 + View
Rosa chinensis RcHm_v2.0_CPg0501911 RcHm_v2.0_CP - View
Salvia bowleyana SalBow1G5124 GWHASIU00000001 - View
Sechium edule Sed0019665 Contig00297 + View
Sechium edule Sed0028104 LG13 - View
Sechium edule Sed0006310 Contig00297 - View
Solanum lycopersicum Solyc00g500071.1 Photosystem II CP43 reaction center protein (AHRD V3.3 *** A0A078EKT7_BRANA) SL4.0ch00 + View
Solanum lycopersicum Solyc00g500158.1 Cytochrome b6-f complex subunit 4 (AHRD V3.3 *** A0A2G2XBM1_CAPBA) SL4.0ch00 - View
Solanum lycopersicum Solyc00g500024.1 Photosystem II CP47 reaction center protein (AHRD V3.3 *** A0A1U8QCF6_CAPAN) SL4.0ch00 + View
Selaginella moellendorffii SMO086G0001 scaffold_175 + View
Selenicereus undatus Hund29033 Scaffold_17839 + View
Selenicereus undatus Hund29678 Scaffold_186 + View
Selenicereus undatus Hund08804 Scaffold_33676 - View
Selenicereus undatus Hund28755 Scaffold_16694 + View