Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G2210 LG-11 - View
Actinidia chinensis Actinidia25776 Lachesis_group13 - View
Avicennia marina MSTRG.4451 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.11g047880 DExH-box ATP-dependent RNA helicase DExH14 (EC 3.6.4.13) (BRR2 homolog C) (AtBRR2C) (Pre-mRNA-splicing helicase BRR2C) AmaHy_arrow1_Scaffold_11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TAYI6X K18663 - activating signal cointegrator complex subunit 3 [EC:3.6.4.12] (ASCC3) arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT5G61140 U5 small nuclear ribonucleoprotein helicase Encodes a predicted protein with 30%25 identity with MER3/RCK. U5 small nuclear ribonucleoprotein helicase%3B FUNCTIONS IN: in 6 functions%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C Sec63 domain (InterPro:IPR004179)%2C Sec63 domain%2C subgroup (InterPro:IPR018127)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase%2C putative (TAIR:AT1G20960.2)%3B Has 20721 Blast hits to 12373 proteins in 2023 species: Archae - 1746%3B Bacteria - 9151%3B Metazoa - 2213%3B Fungi - 2164%3B Plants - 862%3B Viruses - 60%3B Other Eukaryotes - 4525 (source: NCBI BLink). U5 small nuclear ribonucleoprotein helicase%3B FUNCTIONS IN: in 6 functions%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C Sec63 domain (InterPro:IPR004179)%2C Sec63 domain%2C subgroup (InterPro:IPR018127)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase%2C putative (TAIR:AT1G20960.2). Chr5 + View
Citrus clementina Ciclev10018483m.g scaffold_3 - View
Ceratophyllum demersum CDE06G1554 4 + View
Citrullus lanatus ClCG04G011840 Activating signal cointegrator 1 complex subunit 3 CG_Chr04 + View
Cucumis melo MELO3C002023.2 DExH-box ATP-dependent RNA helicase DExH14 chr12 + View
Cucumis sativus L. CsaV3_1G005930 Activating signal cointegrator 1 complex subunit 3 chr1 - View
Davidia involucrata Dinv17404 GWHABJS00000006 + View
Durio zibethinus Duzib205G0140 NW_019168381.1 - View
Eucalyptus grandis Eucgr.B00583 Chr02 - View
Eutrema salsugineum Thhalv10003505m.g K18663 - activating signal cointegrator complex subunit 3 [EC:3.6.4.12] (ASCC3) scaffold_6 - View
Fragaria x ananassa FAN18G1430 K18663 - activating signal cointegrator complex subunit 3 [EC:3.6.4.12] (ASCC3) Fvb5-1 + View
Fragaria x ananassa FAN05G3587 PF02889 - Sec63 Brl domain (Sec63) Fvb6-3 - View
Fragaria x ananassa FAN08G2399 PF00271//PF02889 - Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) Fvb5-3 - View
Fragaria vesca FvH4_5g13990 K18663 - activating signal cointegrator complex subunit 3 [EC:3.6.4.12] (ASCC3) Fvb5 + View
Glycine max Glyma.06G202500 K18663 - activating signal cointegrator complex subunit 3 [EC:3.6.4.12] (ASCC3) Gm06 - View
Hydrangea macrophylla Hma1.2p1_0060F.1_g033190 Hma1.2p1_0060F.1 + View
Lactuca sativa Lsat_1_v5_gn_5_22540 Lsat_1_v8_lg_5 - View
Manihot esculenta Manes.06G085400 Chromosome06 + View
Nelumbo nucifera Nn4g23415 chr4 - View
Punica granatum PGR083G0994 NC_045133.1 - View
Quercus lobata QL10p019292 10 - View
Rosa chinensis RcHm_v2.0_Chr7g0182981 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim08G0146700 chr08 + View
Salvia bowleyana SalBow7G1805 GWHASIU00000005 + View
Solanum pennellii Sopen06g026770 Encodes a predicted protein with 30% identity with MER3/RCK. | U5 small nuclear ribonucleoprotein helicase | FUNCTIONS IN: in 6 functions | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , Sec63 domain , Sec63 domain, subgroup , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative ., Sec63 domain Spenn-ch06 + View
Selenicereus undatus Hund09903 Scaffold_10417 - View
Theobroma cacao Thecc.03G100600 U5 small nuclear ribonucleoprotein helicase Chromosome_3 - View
Vitis vinifera GSVIVG01007875001 chr17 - View