Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G17650 LG-4 + View
Acer truncatum Atru.chr12.2193 chr12 + View
Actinidia chinensis Actinidia34219 Lachesis_group3 + View
Actinidia chinensis Actinidia08649 Lachesis_group6 - View
Arabidopsis lyrata AL5G28970 scaffold_5 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KWX84I PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 (emb1796)%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: glutamine-rich protein 23 (TAIR:AT1G10270.1)%3B Has 36492 Blast hits to 13612 proteins in 345 species: Archae - 36%3B Bacteria - 141%3B Metazoa - 341%3B Fungi - 345%3B Plants - 34345%3B Viruses - 0%3B Other Eukaryotes - 1284 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0602G249 AmTr_v1.0_scaffold00021 + View
Brassica carinata BcaB01g00735 ChrB01 - View
Brassica napus C08p24240 C08 + View
Brassica oleracea BolC8t50041H C8 + View
Capsicum annuum CAN.G481.4 PGAv.1.6.scaffold481 + View
Cannabis sativa CANSAT21G2038 NC_044374.1 - View
Cicer arietinum L. Ca_16706_v3 Ca_LG5_v3 + View
Corylus avellana Haze_00212 Similar to EMB1796: Pentatricopeptide repeat-containing protein At3g49240, mitochondrial (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g01570 Pentatricopeptide repeat-containing protein At3g49240 chr2 - View
Citrus clementina Ciclev10019365m.g scaffold_3 + View
Carpinus fangiana Cfa016229 Cfa06 + View
Cardamine hirsuta CARHR158100 Pentatricopeptide repeat-containing protein Chr5 + View
Carya illinoinensis CiPaw.05G196700 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr05 + View
Cucumis melo MELO3C008493.2 Pentatricopeptide repeat-containing protein, putative chr06 + View
Capsella rubella Carub.0005s1546 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_5 + View
Cucumis sativus L. CsaV3_3G019910 Pentatricopeptide repeat-containing protein chr3 - View
Daucus carota DCAR_008923 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv35334 GWHABJS00000009 - View
Davidia involucrata Dinv29283 GWHABJS00000004 - View
Durio zibethinus Duzib205G1399 NW_019168381.1 + View
Durio zibethinus Duzib068G0148 NW_019167838.1 - View
Eucalyptus grandis Eucgr.K00382 Chr11 + View
Erythranthe guttata Migut.F00214 scaffold_6 - View
Gossypium hirsutum Gohir.A11G015000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A11 + View
Gossypium hirsutum Gohir.D11G015100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D11 + View
Glycine max Glyma.04G235800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm04 - View
Glycine max Glyma.06G128900 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Gm06 + View
Gossypium raimondii Gorai.007G015500 Chr07 + View
Hydrangea macrophylla Hma1.2p1_1507F.1_g287590 Hma1.2p1_1507F.1 + View
Lupinus albus Lalb_Chr11g0066861 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr11 + View
Lupinus albus Lalb_Chr08g0240251 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr08 - View
Lotus japonicus Lj1g0013962 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) chr1 - View
Lonicera japonica Lj3P904T49 GWHAAZE00000003 - View
Lonicera japonica Lj1P1017T24 GWHAAZE00000001 + View
Magnolia biondii MBI06_g46584_MAGBIO AED:0.06 Chr06 + View
Malus domestica MD07G1288700 Pentatricopeptide repeat (PPR) superfamily protein Chr07 - View
Manihot esculenta Manes.01G183200 Chromosome01 + View
Medicago truncatula Medtr3g091460 PPR containing plant-like protein chr3 + View
Nelumbo nucifera Nn3g18985 chr3 - View
Nicotiana tabacum Nitab4.5_0000548g0160 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000548 - View
Olea europaea Oeu041055.1 chr12 - View
Oryza sativa ssp. japonica Os05g0534000 Hypothetical conserved gene. chr05 - View
Petunia axillaris Peaxi162Scf00740g00002 Pentatricopeptide repeat-containing protein Peaxi162Scf00740 + View
Punica granatum PGR142G3289 NC_045128.1 - View
Prunus persica Prupe.2G310200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp02 - View
Pisum sativum Psat5g077680 PPR repeat family chr5LG3 - View
Populus trichocarpa Potri.012G015400 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr12 + View
Phaseolus vulgaris Phvul.009G052600 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr09 - View
Quercus lobata QL09p009182 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0380631 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim03G0208700 chr03 + View
Striga asiatica SGA_v2.0_scaffold192G40548 scaffold192 - View
Striga asiatica SGA_v2.0_scaffold44G16801 scaffold44 + View
Salix brachista Sabra12G0016600 GWHAAZH00000012 - View
Sechium edule Sed0021439 LG13 - View
Solanum lycopersicum Solyc03g083280.4 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CX51_CAPCH) SL4.0ch03 - View
Solanum pennellii Sopen03g023030 embryo defective 1796 (emb1796) | FUNCTIONS IN: ATP binding | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat , Tetratricopeptide-like helical | BEST Arabidopsis thaliana protein match is: glutamine-rich protein 23 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400009084 Pentatricopeptide repeat-containing protein ST4.03ch03 + View
Trochodendron aralioides TAR374G1306 group12 + View
Theobroma cacao Thecc.03G198800 Pentatricopeptide repeat-containing protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104814928 pentatricopeptide repeat-containing protein At3g49240 NW_010965541.1 + View
Trifolium pratense TPR.G19387 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI23G0795 NC_052239.1 - View
Tripterygium wilfordii TWI39G0515 NC_052250.1 + View
Vaccinium macrocarpon vmacro22634 Similar to EMB1796: Pentatricopeptide repeat-containing protein At3g49240, mitochondrial (Arabidopsis thaliana OX%3D3702) scaffold00428_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G2471 CM024072.1 - View