Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB06g28443ChrB06+View
BcaC02g11200ChrC02-View
BcaB06g28524ChrB06+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG5G5670LG-5-View
Acer truncatumAtru.chr5.1644chr5-View
Arabidopsis lyrataAL4G26510scaffold_4+View
Arabidopsis lyrataAL1G16100scaffold_1-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.J1N8MBPTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDarahy.Tifrunner.gnm1.Arahy.02-View
Arabidopsis thalianaAT2G31280transcription factor bHLH155-like protein Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA%2C and can potentially mediate translational regulation of the largest%2C or major%2C ORF (mORF). CPuORF7 represents a conserved upstream opening reading frame relative to major ORF AT2G31280.1 conserved peptide upstream open reading frame 7 (CPUORF7)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06150.2)%3B Has 440 Blast hits to 368 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 436%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr2+View
Arabidopsis thalianaAT1G06150basic helix loop helix (bHLH) DNA-binding superfamily protein EMBRYO DEFECTIVE 1444 (EMB1444)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1)%3B Has 563 Blast hits to 411 proteins in 68 species: Archae - 0%3B Bacteria - 54%3B Metazoa - 32%3B Fungi - 13%3B Plants - 398%3B Viruses - 0%3B Other Eukaryotes - 66 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1).Chr1-View
Brassica napusC04p19320C04+View
Brassica napusA05p14490A05+View
Brassica napusA04p24100A04+View
Brassica napusC04p60810C04+View
Brassica oleraceaBolC4t23465HC4+View
Brassica oleraceaBolC4t27572HC4+View
Brassica rapaBraA04t17930ZA04+View
Brassica rapaBraA05t20380ZA05+View
Beta vulgarisEL10Ac5g10419PTHR13902//PTHR13902:SF55 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // TRANSCRIPTION FACTOR EMB1444-RELATEDChr5_EL10_PGA_scaffold2+View
Corylus avellanaHaze_24600Similar to BHLH155: Transcription factor bHLH155 (Arabidopsis thaliana OX%3D3702)8-View
Coffea canephoraCc01_g18480Putative Transcription factor EMB1444chr1+View
Citrus clementinaCiclev10018993m.gscaffold_3+View
Cardamine hirsutaCARHR124870basic helix-loop-helix (bHLH) DNA-binding superfamily proteinChr4+View
Carya illinoinensisCiPaw.03G261800PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDChr03-View
Carya illinoinensisCiPaw.04G185300PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDChr04-View
Chenopodium quinoaAUR62011893BHLH155: Transcription factor bHLH155C_Quinoa_Scaffold_2008+View
Chenopodium quinoaAUR62024734BHLH155: Transcription factor bHLH155C_Quinoa_Scaffold_1992+View
Capsella rubellaCarub.0004s1257PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDscaffold_4+View
Davidia involucrataDinv34607GWHABJS00000010+View
Durio zibethinusDuzib138G0712NW_019167893.1-View
Erigeron canadensisECA236G3915Conyza_canadensis_scaffold:3+View
Eutrema salsugineumThhalv10016331m.gPTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDscaffold_10+View
Fragaria x ananassaFAN20G2040PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDFvb2-3-View
Fragaria x ananassaFAN15G1929PTHR13902//PTHR13902:SF55 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // TRANSCRIPTION FACTOR EMB1444-RELATEDFvb2-4+View
Fragaria x ananassaFAN27G3149PTHR13902//PTHR13902:SF55 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // TRANSCRIPTION FACTOR EMB1444-RELATEDFvb2-1+View
Fragaria vescaFvH4_2g21810PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDFvb2+View
Hydrangea macrophyllaHma1.2p1_0273F.1_g109880Hma1.2p1_0273F.1+View
Lonicera japonicaLj2A1154T64GWHAAZE00000002+View
Lonicera japonicaLj1A64T38GWHAAZE00000001-View
Malus domesticaMD10G1186300conserved peptide upstream open reading frame 7Chr10+View
Malus domesticaMD05G1200100conserved peptide upstream open reading frame 7Chr05+View
Medicago truncatulaMedtr7g096650bHLH transcription factor-like proteinchr7-View
Medicago truncatulaMedtr1g070180bHLH transcription factor-like proteinchr1+View
Punica granatumPGR044G1137NC_045134.1+View
Prunus persicaPrupe.8G225900Pp08+View
Pisum sativumPsat3g058560BHLH-MYC and R2R3-MYB transcription factors N-terminalchr3LG5+View
Populus trichocarpaPotri.005G222500PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDChr05-View
Phaseolus vulgarisPhvul.007G194600Chr07+View
Quercus lobataQL09p0380799-View
Rosa chinensisRcHm_v2.0_Chr6g0288541RcHm_v2.0_Chr6+View
Rhododendron simsiiRhsim01G0265700chr01+View
Striga asiaticaSGA_v2.0_scaffold138G35255scaffold138+View
Salix brachistaSabra02G0032300GWHAAZH00000002+View
Salix brachistaSabra05G0171200GWHAAZH00000005-View
Schrenkiella parvulaSp4g13760PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATEDch4-6+View
Theobroma cacaoThecc.01G261200Basic helix-loop-helix DNA-binding superfamily proteinChromosome_1+View
Tarenaya hasslerianaTHA.LOC104800877transcription factor bHLH155-likeNW_010969548.1+View
Tripterygium wilfordiiTWI12G0684NC_052243.1-View
Vaccinium macrocarponvmacro14848Similar to EMB1444: Transcription factor EMB1444 (Arabidopsis thaliana OX%3D3702)chr7_Vaccinium_macrocarpon_Stevens_v1+View
Vitis viniferaGSVIVG01028300001chr7-View