Functional clusters

Information

  • Type InterPro
  • Description COPII coat assembly protein, Sec16

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group6 5 CH_ach_144 3 3 0.000000531158
Arabidopsis lyrata scaffold_8 5 CH_aly_224 3 6 0.000000130689
Camellia sinensis var. sinensis Chr6 5 CH_camsi_1546 2 2 0.000962949
Cardamine hirsuta Chr6 5 CH_chi_227 3 3 0.0000000286668
Carica papaya supercontig_29 5 CH_cpa_352 2 2 0.0000950661
Gossypium raimondii Chr01 5 CH_gra_572 2 2 0.000321664
Nicotiana tabacum Nitab4.5_0000712 5 CH_nta_111 3 5 0.000000722306
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_298 4 6 0.0000000000142548
Selaginella moellendorffii scaffold_27 5 CH_smo_1 15 40 9.41527e-31
Schrenkiella parvula ch2-4 5 CH_spa_81 3 3 0.00000000929892
Vanilla planifolia CM028151.1 5 CH_vpl_139 4 39 0.0000000994192
Actinidia chinensis Lachesis_group6 6 CH_ach_144 3 3 0.000000531158
Arabidopsis lyrata scaffold_8 6 CH_aly_224 3 6 0.000000130689
Camellia sinensis var. sinensis Chr6 6 CH_camsi_1546 2 2 0.000962949
Cardamine hirsuta Chr6 6 CH_chi_227 3 3 0.0000000286668
Carica papaya supercontig_29 6 CH_cpa_352 2 2 0.0000950661
Gossypium raimondii Chr01 6 CH_gra_572 2 2 0.000321664
Nicotiana tabacum Nitab4.5_0000712 6 CH_nta_111 3 5 0.000000722306
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_298 4 6 0.0000000000142548
Selaginella moellendorffii scaffold_27 6 CH_smo_1 15 40 9.41527e-31
Schrenkiella parvula ch2-4 6 CH_spa_81 3 3 0.00000000929892
Vanilla planifolia CM028151.1 6 CH_vpl_139 4 39 0.0000000994192

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001