Functional clusters
Information
- Type Gene Ontology
- Description deadenylation-independent decapping of nuclear-transcribed mRNA
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_3 | 3 | CH_aly_363 | 2 | 2 | 0.000990066 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 3 | CH_amhyb_73 | 3 | 4 | 0.00000357039 |
| Aquilegia oxysepala | CHR07 | 3 | CH_aox_116 | 3 | 3 | 0.00000351194 |
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_576 | 2 | 2 | 0.000601633 |
| Brassica carinata | ChrC05 | 3 | CH_bca_453 | 3 | 6 | 0.0000182241 |
| Fragaria x ananassa | Fvb3-2 | 3 | CH_fan_442 | 3 | 9 | 0.000307585 |
| Fragaria x ananassa | Fvb3-1 | 3 | CH_fan_513 | 3 | 11 | 0.000603897 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_204 | 3 | 4 | 0.0000116572 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_67 | 5 | 11 | 0.000000000181988 |
| Gossypium hirsutum | D09 | 3 | CH_ghi_273 | 3 | 3 | 0.00000103632 |
| Magnolia biondii | Chr15 | 3 | CH_mbi_137 | 4 | 6 | 0.00000000255089 |
| Punica granatum | NC_045133.1 | 3 | CH_pgr_86 | 5 | 13 | 0.000000000392995 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_102 | 7 | 32 | 0.000000000000127745 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_105 | 8 | 74 | 0.000000000000198247 |
| Sapria himalayana | scaffold27_7528638 | 3 | CH_shi_111 | 3 | 7 | 0.00000600532 |
| Arabidopsis lyrata | scaffold_3 | 4 | CH_aly_363 | 2 | 2 | 0.000990066 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 4 | CH_amhyb_73 | 3 | 4 | 0.00000357039 |
| Aquilegia oxysepala | CHR07 | 4 | CH_aox_116 | 3 | 3 | 0.00000351194 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_576 | 2 | 2 | 0.000601633 |
| Brassica carinata | ChrC05 | 4 | CH_bca_453 | 3 | 6 | 0.0000182241 |
| Fragaria x ananassa | Fvb3-2 | 4 | CH_fan_442 | 3 | 9 | 0.000307585 |
| Fragaria x ananassa | Fvb3-1 | 4 | CH_fan_513 | 3 | 11 | 0.000603897 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_204 | 3 | 4 | 0.0000116572 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_67 | 5 | 11 | 0.000000000181988 |
| Gossypium hirsutum | D09 | 4 | CH_ghi_273 | 3 | 3 | 0.00000103632 |
| Magnolia biondii | Chr15 | 4 | CH_mbi_137 | 4 | 6 | 0.00000000255089 |
| Punica granatum | NC_045133.1 | 4 | CH_pgr_86 | 5 | 13 | 0.000000000392995 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_102 | 7 | 32 | 0.000000000000127745 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_105 | 8 | 74 | 0.000000000000198247 |
| Sapria himalayana | scaffold27_7528638 | 4 | CH_shi_111 | 3 | 7 | 0.00000600532 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |