Functional clusters
Information
- Type Gene Ontology
- Description structural constituent of nuclear pore
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr10 | 3 | CH_acertr_91 | 4 | 5 | 0.00000000956221 |
| Brassica napus | C07 | 3 | CH_bna_442 | 3 | 5 | 0.0000732907 |
| Camellia sinensis var. sinensis | Chr6 | 3 | CH_camsi_103 | 5 | 5 | 0.0000000000125023 |
| Camellia sinensis var. sinensis | Chr3 | 3 | CH_camsi_204 | 7 | 77 | 0.0000000140913 |
| Ceratophyllum demersum | 9 | 3 | CH_cde_118 | 3 | 4 | 0.000122519 |
| Citrullus lanatus | CG_Chr02 | 3 | CH_cla_40 | 4 | 6 | 0.0000000571311 |
| Carica papaya | supercontig_169 | 3 | CH_cpa_13 | 6 | 7 | 0.0000000000000473947 |
| Chlamydomonas reinhardtii | chromosome_6 | 3 | CH_cre_34 | 3 | 3 | 0.00000706305 |
| Durio zibethinus | NW_019168048.1 | 3 | CH_dzi_157 | 3 | 3 | 0.0000049625 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_568 | 5 | 56 | 0.00000383625 |
| Helianthus annuus | HanXRQChr02 | 3 | CH_han_424 | 3 | 4 | 0.0000261978 |
| Hydrangea macrophylla | Hma1.2p1_0133F.1 | 3 | CH_hma_102 | 3 | 3 | 0.00000529424 |
| Malus domestica | Chr10 | 3 | CH_mdo_200 | 4 | 6 | 0.0000000771503 |
| Malus domestica | Chr16 | 3 | CH_mdo_411 | 3 | 4 | 0.0000387678 |
| Petunia axillaris | Peaxi162Scf00035 | 3 | CH_pax_166 | 3 | 4 | 0.0000242252 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_198 | 3 | 3 | 0.00000472967 |
| Physcomitrium patens | Chr26 | 3 | CH_ppa_107 | 3 | 5 | 0.0000866468 |
| Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_294 | 3 | 6 | 0.0000225914 |
| Sequoiadendron giganteum | HRSCAF_1 | 3 | CH_sgi_1175 | 3 | 5 | 0.000194002 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_507 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_508 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_578 | 4 | 5 | 0.0000000709242 |
| Sequoiadendron giganteum | HRSCAF_1 | 3 | CH_sgi_886 | 3 | 3 | 0.0000194225 |
| Sapria himalayana | scaffold8_16897533 | 3 | CH_shi_109 | 4 | 11 | 0.00000505067 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_171 | 4 | 6 | 0.000000186098 |
| Acer truncatum | chr10 | 4 | CH_acertr_91 | 4 | 5 | 0.00000000956221 |
| Brassica napus | C07 | 4 | CH_bna_442 | 3 | 5 | 0.0000732907 |
| Camellia sinensis var. sinensis | Chr6 | 4 | CH_camsi_103 | 5 | 5 | 0.0000000000125023 |
| Camellia sinensis var. sinensis | Chr3 | 4 | CH_camsi_204 | 7 | 77 | 0.0000000140913 |
| Ceratophyllum demersum | 9 | 4 | CH_cde_118 | 3 | 4 | 0.000122519 |
| Citrullus lanatus | CG_Chr02 | 4 | CH_cla_40 | 4 | 6 | 0.0000000571311 |
| Carica papaya | supercontig_169 | 4 | CH_cpa_13 | 6 | 7 | 0.0000000000000473947 |
| Chlamydomonas reinhardtii | chromosome_6 | 4 | CH_cre_34 | 3 | 3 | 0.00000706305 |
| Durio zibethinus | NW_019168048.1 | 4 | CH_dzi_157 | 3 | 3 | 0.0000049625 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_568 | 5 | 56 | 0.00000383625 |
| Helianthus annuus | HanXRQChr02 | 4 | CH_han_424 | 3 | 4 | 0.0000261978 |
| Hydrangea macrophylla | Hma1.2p1_0133F.1 | 4 | CH_hma_102 | 3 | 3 | 0.00000529424 |
| Malus domestica | Chr10 | 4 | CH_mdo_200 | 4 | 6 | 0.0000000771503 |
| Malus domestica | Chr16 | 4 | CH_mdo_411 | 3 | 4 | 0.0000387678 |
| Petunia axillaris | Peaxi162Scf00035 | 4 | CH_pax_166 | 3 | 4 | 0.0000242252 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_198 | 3 | 3 | 0.00000472967 |
| Physcomitrium patens | Chr26 | 4 | CH_ppa_107 | 3 | 5 | 0.0000866468 |
| Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_294 | 3 | 6 | 0.0000225914 |
| Sequoiadendron giganteum | HRSCAF_1 | 4 | CH_sgi_1175 | 3 | 5 | 0.000194002 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_507 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_508 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_578 | 4 | 5 | 0.0000000709242 |
| Sequoiadendron giganteum | HRSCAF_1 | 4 | CH_sgi_886 | 3 | 3 | 0.0000194225 |
| Sapria himalayana | scaffold8_16897533 | 4 | CH_shi_109 | 4 | 11 | 0.00000505067 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_171 | 4 | 6 | 0.000000186098 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |