Functional clusters

Information

  • Type Gene Ontology
  • Description chloroplast thylakoid

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Magnolia biondii Chr02 3 CH_mbi_556 4 4 0.00030652
Solanum tuberosum ST4.03ch12 3 CH_stu_325 8 24 0.0000154379
Vanilla planifolia JADCNL010000483.1 3 CH_vpl_31 11 22 0.0000000000776899
Magnolia biondii Chr02 4 CH_mbi_556 4 4 0.00030652
Solanum tuberosum ST4.03ch12 4 CH_stu_325 8 24 0.0000154379
Vanilla planifolia JADCNL010000483.1 4 CH_vpl_31 11 22 0.0000000000776899

Available child term results

Ontology identifier Description Number of clusters
GO:0009515 granal stacked thylakoid 2
GO:0009517 PSII associated light-harvesting complex II 2
GO:0009533 chloroplast stromal thylakoid 2
GO:0009535 chloroplast thylakoid membrane 46
GO:0009543 chloroplast thylakoid lumen 2
GO:0030093 chloroplast photosystem I 2
GO:0030095 chloroplast photosystem II 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001