Functional clusters

Information

  • Type Gene Ontology
  • Description autophagy

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 3 CH_acertr_335 3 3 0.0000920022
Brassica carinata ChrB06 3 CH_bca_663 3 3 0.000178302
Magnolia biondii Chr01 3 CH_mbi_638 3 5 0.000692244
Quercus lobata 4 3 CH_qlo_435 5 12 0.000000108911
Simmondsia chinensis GWHAASQ00000019 3 CH_sci_68 5 10 0.000000231428
Vitis vinifera chr19 3 CH_vvi_366 3 4 0.000398067
Acer truncatum chr5 4 CH_acertr_335 3 3 0.0000920022
Brassica carinata ChrB06 4 CH_bca_663 3 3 0.000178302
Magnolia biondii Chr01 4 CH_mbi_638 3 5 0.000692244
Quercus lobata 4 4 CH_qlo_435 5 12 0.000000108911
Simmondsia chinensis GWHAASQ00000019 4 CH_sci_68 5 10 0.000000231428
Vitis vinifera chr19 4 CH_vvi_366 3 4 0.000398067

Available child term results

Ontology identifier Description Number of clusters
GO:0000422 autophagy of mitochondrion 16
GO:0010506 regulation of autophagy 4
GO:0010507 negative regulation of autophagy 2
GO:0030242 autophagy of peroxisome 24
GO:0034263 positive regulation of autophagy in response to ER overload 2
GO:0071211 protein targeting to vacuole involved in autophagy 8
GO:0071562 nucleus-vacuole junction assembly 2
GO:1905037 autophagosome organization 4
GO:2000786 positive regulation of autophagosome assembly 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001