Functional clusters

Information

  • Type Gene Ontology
  • Description mitochondrial electron transport, cytochrome c to oxygen

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 3 CH_bca_204 3 3 0.0000000575765
Brassica carinata ChrC01 3 CH_bca_951 2 2 0.000769551
Brassica carinata ChrC09 3 CH_bca_952 2 2 0.000769551
Brassica rapa A03 3 CH_bra_260 2 2 0.000429314
Citrullus lanatus CG_Chr07 3 CH_cla_127 2 3 0.000266123
Chenopodium quinoa C_Quinoa_Scaffold_3333 3 CH_cqu_544 2 4 0.000852811
Daucus carota DCARv2_Chr7 3 CH_dca_93 3 4 0.0000000244055
Eutrema salsugineum scaffold_13 3 CH_esa_196 2 2 0.00022845
Nicotiana tabacum Nitab4.5_0000151 3 CH_nta_116 2 2 0.000329182
Papaver somniferum NW_020634374.1 3 CH_pso_465 2 2 0.0000675881
Sechium edule LG06 3 CH_sed_139 3 11 0.0000125884
Brassica carinata ChrC05 4 CH_bca_204 3 3 0.0000000575765
Brassica carinata ChrC01 4 CH_bca_951 2 2 0.000769551
Brassica carinata ChrC09 4 CH_bca_952 2 2 0.000769551
Brassica rapa A03 4 CH_bra_260 2 2 0.000429314
Citrullus lanatus CG_Chr07 4 CH_cla_127 2 3 0.000266123
Chenopodium quinoa C_Quinoa_Scaffold_3333 4 CH_cqu_544 2 4 0.000852811
Daucus carota DCARv2_Chr7 4 CH_dca_93 3 4 0.0000000244055
Eutrema salsugineum scaffold_13 4 CH_esa_196 2 2 0.00022845
Nicotiana tabacum Nitab4.5_0000151 4 CH_nta_116 2 2 0.000329182
Papaver somniferum NW_020634374.1 4 CH_pso_465 2 2 0.0000675881
Sechium edule LG06 4 CH_sed_139 3 11 0.0000125884

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001